Gene Saro_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2015 
Symbol 
ID3917336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2146923 
End bp2148500 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content68% 
IMG OID640444767 
ProductABC transporter related 
Protein accessionYP_497288 
Protein GI87200031 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.406124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCTT CGATAACTGT CTCCTCTCTT TCCTGGTCCA CGCCTGACGG CCGGCCGGTC 
CTTTCCGGCC TCGACCTCTC TTTCGCTGCT GAACGCACCG GCATTGTTGG CCGCAACGGC
ACCGGCAAGT CCACTCTGCT GCGTCTGATC GCCGGAGAGC TTGCGCCGTC ATCCGGCAGG
ATCGTCGTCA ATGGAACGAT CGCCGTCCTG CGCCAGATCG TGGCCCGCAA CCCCGGCGAG
ACGCTGGCCG AGGCATTGGG CATTGCCGAC GATCTTGCAC TCCTGCGCCG TGCGGAACAG
GGGCTTGCCA GCGTCGATGA TCTCGAACGC GCCGACTGGA CCCTGGAGAG CCGCCTGGCC
GAGGCCTTTG CCCAGGCCGG CCTTGCCGCC ACCGCGCAGA CCCCCGTCGC CACGTTGTCG
GGCGGCCAGC AGACCCGTGC CGGGCTTGCC GCCGCGATCC TTGCCGATCC CGACTTCCTC
CTGCTCGACG AACCGACCAA CAACCTCGAT GCCGAAGGAC GCGAAAGCCT TGGCGCATTC
CTTGCGGGCT GGCGCAAGGG CGCGCTGGTG GTCAGCCACG ACCGCCACCT CCTCGAAGGA
ATGGACGCCG TGGTCGAGCT GACCTCGCTT GGCGCGACGC GCTATGGCGG GCCATACAGC
CACTACCGCG AACGCAAGGA TCTGGAACTC GCCACCGCGC GCCAGGAACG CGATCTCGCG
GAACGGGCGC TCGGCCAGGT GCGCGAAAGC GCGCAGACCG CGCGTGAGCG AAAGGACCGG
CGCGATGGCG TCGGCCAGAA GAAGGCGCGC AAGGGCGACA TGCCGCGCAT CCTGATCGGC
GCGCGCAAGG AGCGGGCGGA AAACACCACC GGATCCAACG CCCGTCTCGC CGAACGCGAG
GCCGCCGAAG CAGCCGAGCG CCTCGCCGAA GCCCGCGCTC GCCTCGAAGT GGTCGAACCC
CTGCGGGTCG AACTCCTCCC CACAGGGCTC GCCGCCTCGC GAACGGTGGT CGAACTCATC
GACGTCACCT TTGGCCATGG CGATGCTCCG CCGCTGTTCT CCGCTCTCGA TCTTGCCGTC
GTGGGACCGG AACGCATCGC CATCACCGGC CCCAACGGTG CAGGGAAATC GAGCCTGATC
CATCTGATCG CCGGCAACCT GAAACCGCGC GCCGGCAGCG TCCGGGTGCC GGTGCCCTTC
GCCCTGCTGG ACCAGCACGC CAGCCTGCTC GATCCCGCCC TGAGCATCGT CGGCAACCTC
CGAAAGCTAA AGCCAGACCT GGACGAGAAC GCCGCCCGCG CGGCGCTGGC CCGCTTCGGT
TTCCGGGCAA GTGCGGCGGA CCAGACGGTG TCGACGCTAA GCGGCGGCCA GGCGATCCGC
GCCGCGCTGG CCTGCGTCCT TGCGGGAACG CCCCCGCATC TTCTGCTGCT GGACGAGCCG
ACCAACCATC TCGACCTCGA CGCCATCCAG GCGATCGAGG CAGGGCTGTC CGCCTACGAT
GGCGCGCTGA TAGCGGTAAG CCACGACGTG GCGTTCCTCG ATGCCATCGC CATCACGCGC
CGGGTCACGC TGGAATAG
 
Protein sequence
MPASITVSSL SWSTPDGRPV LSGLDLSFAA ERTGIVGRNG TGKSTLLRLI AGELAPSSGR 
IVVNGTIAVL RQIVARNPGE TLAEALGIAD DLALLRRAEQ GLASVDDLER ADWTLESRLA
EAFAQAGLAA TAQTPVATLS GGQQTRAGLA AAILADPDFL LLDEPTNNLD AEGRESLGAF
LAGWRKGALV VSHDRHLLEG MDAVVELTSL GATRYGGPYS HYRERKDLEL ATARQERDLA
ERALGQVRES AQTARERKDR RDGVGQKKAR KGDMPRILIG ARKERAENTT GSNARLAERE
AAEAAERLAE ARARLEVVEP LRVELLPTGL AASRTVVELI DVTFGHGDAP PLFSALDLAV
VGPERIAITG PNGAGKSSLI HLIAGNLKPR AGSVRVPVPF ALLDQHASLL DPALSIVGNL
RKLKPDLDEN AARAALARFG FRASAADQTV STLSGGQAIR AALACVLAGT PPHLLLLDEP
TNHLDLDAIQ AIEAGLSAYD GALIAVSHDV AFLDAIAITR RVTLE