Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2015 |
Symbol | |
ID | 3917336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2146923 |
End bp | 2148500 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640444767 |
Product | ABC transporter related |
Protein accession | YP_497288 |
Protein GI | 87200031 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.406124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCGCTT CGATAACTGT CTCCTCTCTT TCCTGGTCCA CGCCTGACGG CCGGCCGGTC CTTTCCGGCC TCGACCTCTC TTTCGCTGCT GAACGCACCG GCATTGTTGG CCGCAACGGC ACCGGCAAGT CCACTCTGCT GCGTCTGATC GCCGGAGAGC TTGCGCCGTC ATCCGGCAGG ATCGTCGTCA ATGGAACGAT CGCCGTCCTG CGCCAGATCG TGGCCCGCAA CCCCGGCGAG ACGCTGGCCG AGGCATTGGG CATTGCCGAC GATCTTGCAC TCCTGCGCCG TGCGGAACAG GGGCTTGCCA GCGTCGATGA TCTCGAACGC GCCGACTGGA CCCTGGAGAG CCGCCTGGCC GAGGCCTTTG CCCAGGCCGG CCTTGCCGCC ACCGCGCAGA CCCCCGTCGC CACGTTGTCG GGCGGCCAGC AGACCCGTGC CGGGCTTGCC GCCGCGATCC TTGCCGATCC CGACTTCCTC CTGCTCGACG AACCGACCAA CAACCTCGAT GCCGAAGGAC GCGAAAGCCT TGGCGCATTC CTTGCGGGCT GGCGCAAGGG CGCGCTGGTG GTCAGCCACG ACCGCCACCT CCTCGAAGGA ATGGACGCCG TGGTCGAGCT GACCTCGCTT GGCGCGACGC GCTATGGCGG GCCATACAGC CACTACCGCG AACGCAAGGA TCTGGAACTC GCCACCGCGC GCCAGGAACG CGATCTCGCG GAACGGGCGC TCGGCCAGGT GCGCGAAAGC GCGCAGACCG CGCGTGAGCG AAAGGACCGG CGCGATGGCG TCGGCCAGAA GAAGGCGCGC AAGGGCGACA TGCCGCGCAT CCTGATCGGC GCGCGCAAGG AGCGGGCGGA AAACACCACC GGATCCAACG CCCGTCTCGC CGAACGCGAG GCCGCCGAAG CAGCCGAGCG CCTCGCCGAA GCCCGCGCTC GCCTCGAAGT GGTCGAACCC CTGCGGGTCG AACTCCTCCC CACAGGGCTC GCCGCCTCGC GAACGGTGGT CGAACTCATC GACGTCACCT TTGGCCATGG CGATGCTCCG CCGCTGTTCT CCGCTCTCGA TCTTGCCGTC GTGGGACCGG AACGCATCGC CATCACCGGC CCCAACGGTG CAGGGAAATC GAGCCTGATC CATCTGATCG CCGGCAACCT GAAACCGCGC GCCGGCAGCG TCCGGGTGCC GGTGCCCTTC GCCCTGCTGG ACCAGCACGC CAGCCTGCTC GATCCCGCCC TGAGCATCGT CGGCAACCTC CGAAAGCTAA AGCCAGACCT GGACGAGAAC GCCGCCCGCG CGGCGCTGGC CCGCTTCGGT TTCCGGGCAA GTGCGGCGGA CCAGACGGTG TCGACGCTAA GCGGCGGCCA GGCGATCCGC GCCGCGCTGG CCTGCGTCCT TGCGGGAACG CCCCCGCATC TTCTGCTGCT GGACGAGCCG ACCAACCATC TCGACCTCGA CGCCATCCAG GCGATCGAGG CAGGGCTGTC CGCCTACGAT GGCGCGCTGA TAGCGGTAAG CCACGACGTG GCGTTCCTCG ATGCCATCGC CATCACGCGC CGGGTCACGC TGGAATAG
|
Protein sequence | MPASITVSSL SWSTPDGRPV LSGLDLSFAA ERTGIVGRNG TGKSTLLRLI AGELAPSSGR IVVNGTIAVL RQIVARNPGE TLAEALGIAD DLALLRRAEQ GLASVDDLER ADWTLESRLA EAFAQAGLAA TAQTPVATLS GGQQTRAGLA AAILADPDFL LLDEPTNNLD AEGRESLGAF LAGWRKGALV VSHDRHLLEG MDAVVELTSL GATRYGGPYS HYRERKDLEL ATARQERDLA ERALGQVRES AQTARERKDR RDGVGQKKAR KGDMPRILIG ARKERAENTT GSNARLAERE AAEAAERLAE ARARLEVVEP LRVELLPTGL AASRTVVELI DVTFGHGDAP PLFSALDLAV VGPERIAITG PNGAGKSSLI HLIAGNLKPR AGSVRVPVPF ALLDQHASLL DPALSIVGNL RKLKPDLDEN AARAALARFG FRASAADQTV STLSGGQAIR AALACVLAGT PPHLLLLDEP TNHLDLDAIQ AIEAGLSAYD GALIAVSHDV AFLDAIAITR RVTLE
|
| |