Gene Saro_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2007 
Symbol 
ID3917327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp2140974 
End bp2141588 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID640444758 
ProductGTP cyclohydrolase 
Protein accessionYP_497280 
Protein GI87200023 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.39333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTC TGGTTGGGCC CGACGAGGAC GATGATCTGG CCCGGGGCAA GGTGCCCGTG 
CCCCAGGACG TGCAGGACGC GATCCGCACG CTGATCCGCT GGTCCGGCGA CGATCCGGAG 
CGTGAAGGCC TGCTCGACAC GCCCAAGCGC GTGGCGCGGG CGTGGAAGGA ATACTGCCAG 
GGCTATGGCG AGGACCCGGC GGTCCATCTT TCGCGCCAGT TCGAGGAAGT GGGCGGCTAC 
GACGAGATCG TGCTGCTGAA GGACATTCCG TTCCAGTCGC ACTGCGAACA CCACATGGCG 
CCGATCATCG GCAAGGCGGC GATTGCCTAT CTGCCGCGCG ACAAGGTGGT CGGCATCTCG 
AAGCTGGCGC GGGTGCTGCA TGGCTTTGCG CGTCGCCTGC AGATTCAGGA ACGGCTTACG 
GCAGAGGTCG CCCAGTGCAT CTGGGACAAC CTGCGGCCGC ATGGCGTTGC GGTGGTAATC 
GAGGCACAGC ACGCGTGCAT GACCGCGCGC GGTGTGCGGA CGCCCGGCGT CGGCATGGTG 
ACGAGCCGCC TGATGGGCAC GTTCCTCGAC GACAACCGCA GCCGCAAGGA AGTGCTGAGC 
TTGATGGGCT ATTGA
 
Protein sequence
MSSLVGPDED DDLARGKVPV PQDVQDAIRT LIRWSGDDPE REGLLDTPKR VARAWKEYCQ 
GYGEDPAVHL SRQFEEVGGY DEIVLLKDIP FQSHCEHHMA PIIGKAAIAY LPRDKVVGIS 
KLARVLHGFA RRLQIQERLT AEVAQCIWDN LRPHGVAVVI EAQHACMTAR GVRTPGVGMV 
TSRLMGTFLD DNRSRKEVLS LMGY