| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1983 |
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| Symbol | |
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| ID | 3917302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2103173 |
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| End bp | 2104465 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640444734 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_497257 |
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| Protein GI | 87200000 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGCG CCATCCCGCC AGACGCGATC GACGACGAAT CCCGCGACAC TTTGACGGGC
CTTGCAGGCA TCGCCTCCGC GAGCGACTGG CTGGATCGGA ACGGGGCCAA AGGCTTCGTT
CACGCCATGC TGTTGGGCCT GCACCGGTTC CGGTCGGTGA ACCTGGCTTA CGGGCAGTCG
GCGGGAGACA TCGCGCTGGT CGAGCTGGCC CAACGCATTC GGATCTTTGC CGACGAGGAG
ATTGGTGGCG ATACTTTGGT CGCGCGCGTC GGTGGCGGCG ATTTCCTTGT TGCAAGCGCC
GGCAAGGTCA GCCGGGAGCG GTGGCAGTGG CTTGCCGAAG CCCTGGCGCG GCGCGTGTCG
CGAGTGCTGC CGCTTCGGGG AGAGGAGCTA CAACTGGCGC CTCGCATTGC GCTGCTCCGA
GGGCAGCCCG GGGAGGGTGG CCCGGCGTTG CTCGATCGGC TGGACCAGGC GCTTACGACC
CTTCAGCAGC AGCCGGCGCG CCGCCTTCAG TGGGCCGATG GGTCGCATCT TGCGCGGGGG
AGGAGCGCCG CGCGACTGGA AGCCGACATG ATCGGGGCAA TGGCAAGGGA CGAAATCGGC
ATCGTCTTCC AGCCGCAGTA CGCGGTGGCC GGAGGGGATA TCGTGGGGGT GGAGGCGCTG
GCCCGTTGGG ATCATCCGCA GCTGGGAAGG ATAGGCGCCG AAACGCTGTT CGCCTTGGCC
GAGCGTGGAG ACCACGTGGC GCAGGTTTCG CGGCACATTG CCGGTCGCGC GATGTGGCAG
GCCGTAGAAT GGAAACCCGT TATTCCACTT TCACTGAACA TCACGGCTGA GGATCTCGGG
GACGACCGCC TTGTCGAGGA TTGCCGCTTG CTGCTGGCAC AGACGGGTTA TCCTCCTTCG
AGCCTGACTG TCGAGGTTAC CGAACATGCC CTGATCGCCG ACTTCGAACG TTCCGCCGCC
GCACTCGAGC AGCTTGCCCG GCTAGGCGTG AGGATCGCGC TCGACGATTT CGGCGCCGGC
TATGCCAACT TCCGTACGCT CAAGGCCCTC CCGGTGAACA CCTTGAAGCT CGACGCATCC
CTGGTCAGGG ACATCGACCG CGACCCGCGC GACCGGGCGA TCCTGCGGGC CATCGTGGCA
ATGGCGCGTG CGCTGGGCCA GAAGGTTGTC GTCGAGGGTA TCGAACGGGA AAGCCAGCTA
CAGGTGCTTG CAGCGGAAGG ATGTGACGCC TTCCAGGGGT TCTTGCGGTC AGGCCCGATC
CCCGCCGATC AGATTGCCGC ACTCTCCCGC TAG
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| Protein sequence | MDSAIPPDAI DDESRDTLTG LAGIASASDW LDRNGAKGFV HAMLLGLHRF RSVNLAYGQS
AGDIALVELA QRIRIFADEE IGGDTLVARV GGGDFLVASA GKVSRERWQW LAEALARRVS
RVLPLRGEEL QLAPRIALLR GQPGEGGPAL LDRLDQALTT LQQQPARRLQ WADGSHLARG
RSAARLEADM IGAMARDEIG IVFQPQYAVA GGDIVGVEAL ARWDHPQLGR IGAETLFALA
ERGDHVAQVS RHIAGRAMWQ AVEWKPVIPL SLNITAEDLG DDRLVEDCRL LLAQTGYPPS
SLTVEVTEHA LIADFERSAA ALEQLARLGV RIALDDFGAG YANFRTLKAL PVNTLKLDAS
LVRDIDRDPR DRAILRAIVA MARALGQKVV VEGIERESQL QVLAAEGCDA FQGFLRSGPI
PADQIAALSR
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