Gene Saro_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1967 
Symbol 
ID3917283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp2084730 
End bp2085737 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content62% 
IMG OID640444715 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_497241 
Protein GI87199984 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0580164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCA AGGTTGCGAT CAACGGTTTC GGACGCATCG GGCGCAATGT GGCCCGCGCC 
ATTCTCGAAC GTCCCGATTG CGGGCTCGAA CTGGTTTCGA TCAACGACCT GGCCGACGCC 
AAGGCTAACG CCCTGCTGTT CAAGCGCGAC AGCGTCCATG GCGCGTTCTC GGGCGAAGTC 
TCGGTCGATG GCAACGACCT GATCGTCAAC GGCAAGCGCA TCCAGGTGAC TGCCGAGCGC 
GACCCGGCCA ACCTGCCGCA CGGAGCCAAC GGCATTGACA TCGCGCTGGA ATGCACCGGC 
TTTTTCACCA ATCGCGATGG CGGCCAGAAG CACCTCGACG CCGGCGCCAA GCGCGTTCTG 
ATTTCCGCTC CGGCAAAGAA CGTCGACCTG ACGGTCGTCT ATGGCGTGAA CCACGACAAG 
CTGACCGGCG ATCACAAGAT CGTCTCCAAC GCGTCGTGCA CCACCAACTG CCTCGCGCCG 
ATGGCCAAGG TCCTGCATGA ATCGATCGGG ATCGAGCGTG GTCTGATGAC CACGATCCAT 
TCGTACACCA ACGACCAGAA GATCCTCGAC CAGATCCACA GCGATCCGCG CCGCGCCCGC 
GCAGCCGCGA TGAACATGAT CCCCACCAGC ACCGGCGCCG CCGTTGCAGT GGGTGAAGTT 
CTGCCCGACC TCAAGGGCAA GCTTGACGGT TCGTCGATCC GCGTCCCGAC CCCGAACGTC 
TCGGTCGTGG ACCTTACCTT CACGCCGAAG CGCGACACCT CGGTCGAGGA AGTCAACGGT 
CTCCTCAAGG CGGCTGCCGA AGGCGCACTC AAGGGCGTGC TTGGCTACAC CGACGAACCG 
CTGGTTTCGA TCGACTTTAA CCACGATCCG CATTCGTCGA CCATCGACAG CCTTGAGACT 
GCCGTGCTCG AAGGCAAGCT GGTCCGCGTC CTGTCGTGGT ACGACAACGA GTGGGGCTTC 
TCCAACCGCA TGCTCGACAC GGCGGGCGCA ATGGCGAAGT TCCTCTGA
 
Protein sequence
MAIKVAINGF GRIGRNVARA ILERPDCGLE LVSINDLADA KANALLFKRD SVHGAFSGEV 
SVDGNDLIVN GKRIQVTAER DPANLPHGAN GIDIALECTG FFTNRDGGQK HLDAGAKRVL 
ISAPAKNVDL TVVYGVNHDK LTGDHKIVSN ASCTTNCLAP MAKVLHESIG IERGLMTTIH 
SYTNDQKILD QIHSDPRRAR AAAMNMIPTS TGAAVAVGEV LPDLKGKLDG SSIRVPTPNV 
SVVDLTFTPK RDTSVEEVNG LLKAAAEGAL KGVLGYTDEP LVSIDFNHDP HSSTIDSLET 
AVLEGKLVRV LSWYDNEWGF SNRMLDTAGA MAKFL