Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1934 |
Symbol | |
ID | 3917157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2048323 |
End bp | 2049489 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640444680 |
Product | phage integrase |
Protein accession | YP_497208 |
Protein GI | 87199951 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGGCG GTCGCCGGTC GTGGACGGTA TTGGATGATG ACGGCGATGT CGTCGAGTGC CTTCGTCACT GGATCGTCCA TCTCGAACAG ACCCATGCGT CACCAAACAC GATCCGCGCT TATGTTCGCC ACGTTGTGGA CTTCGCTAGC TTCCTCGGCG CAAACGGCGC CGGCATCCAT GAAGCCACGG TTGCGCTGTA TGACAGCTTC CTTGCCTGGC GGCTTGCCCG CCGAAAGGAT GCGCTGCCAA GTCCTCGGCT GATCCTGCTA CGCAAGCAGG AAACGCGGAT TCTGGCACCA TCGACGCGCA ACCAGATCCA GCTCGCGGTC AAATCGTTCT ACCGCTTTTA CAACGGCACT GACGACTTCG CGGTCGATAC GACCGAGGTC ACAAAGGCCT ATGACGGCCA CCGGATCTAC AAGCCGTTCC TTGAGCATAT CAGCCAGCGA CGGACGACAC GGCGCAAAGA CCGTTATCTC TCGGGCGATC CCGGCCGGGT CCAGCAGCAG GTGCTCAAGA AGCGGCTGAC GCCGAGCGAG GTTCTGCGGC TGATCGAGGC CTGCGGGCTC GCGCGCGACG CCTTCCTGGT CGTGCTGCTC TACAACACCG GCCTTAGGAT CGGTGAAGCG CTGGGCCTGC GCCATGTCGA TATCGATCTC GCCGAAAAGG TCATCTGGGT CGTTCCGCGC GAAGACAATG CCAATGAGGC CCGTGCGAAA TCGGGCCGGA CGCGCGGTGT GCCGGTGCAC GACTACGTGC TCAACATGTA CGTCGATTAC ATCACCAGCG ACGAATATCT GCCAGCCTTC GAGTCCGGCG CCGAGTACGT CTTCACCAAT GTCAAAGCCG GCGTCATCGG GCACGCCATG AGCCTGTCCT ACGCGCAGAA GCTCGCGGGC CTGCTGGAGC AGCGCACCCA TATCGCCTTC AGCTGGCACA TGTTCCGCCA CAGCCATGCA TCCGAGGCGA TCGCGGCGGG ATACAGCCTG CTCGAAGTGG CCGACCGGCT CGGGCATGCC AGCCCGCAAA CGACAGCGGC GTTCTATCAG CACCTGTTCG CCTCGGAAAT CCGCAGGCTT TACCTCACAG GACCCGACGA GGTGCATGAA AGGCTTGAGA AACTTCGCGA GGCTGAGCTG CTCGGAAAGG ATCTGCGATG GGCCTGA
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Protein sequence | MPGGRRSWTV LDDDGDVVEC LRHWIVHLEQ THASPNTIRA YVRHVVDFAS FLGANGAGIH EATVALYDSF LAWRLARRKD ALPSPRLILL RKQETRILAP STRNQIQLAV KSFYRFYNGT DDFAVDTTEV TKAYDGHRIY KPFLEHISQR RTTRRKDRYL SGDPGRVQQQ VLKKRLTPSE VLRLIEACGL ARDAFLVVLL YNTGLRIGEA LGLRHVDIDL AEKVIWVVPR EDNANEARAK SGRTRGVPVH DYVLNMYVDY ITSDEYLPAF ESGAEYVFTN VKAGVIGHAM SLSYAQKLAG LLEQRTHIAF SWHMFRHSHA SEAIAAGYSL LEVADRLGHA SPQTTAAFYQ HLFASEIRRL YLTGPDEVHE RLEKLREAEL LGKDLRWA
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