| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1915 |
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| Symbol | |
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| ID | 3917138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2026593 |
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| End bp | 2027963 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640444661 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_497189 |
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| Protein GI | 87199932 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.240415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCATC AGGTACACAT CATTGGCGGC GGCATGGCCG GAACGGAGGC CGCCTGGCAA
CTTGCGCGCC GGGGCATTCG TGTGCGGCTG TCCGAAATGC GCGGAGGCGG CGATACTACT
CCCGCCCACA ACGGAGACGG GCTTGCCGAA CTGGTCTGCT CCAACTCGTT CCGGTCGGAC
GACGACGAAA AGAACGCGGT TGGCCTGCTG CACTACGAGA TGAGGCAATG TGACAGCCTG
CTGATGGCAG CGGCGGCCAA GGCGCGCGTT CCGGCGGGGT CGGCGCTGGC GGTTGACCGG
GATGTATTCT CGGCCGAAGT CGAAGCCGCG TTGCGCGCGC AGCCGACGCT GGAGATCGTG
CGCGAGCGGG TCGATGTGCT GCCGTCGGAT GGCCTGACCA TTGTGGCGAC CGGCCCGCTC
ACCGCGCCGT CGCTGGCTAA CAGCATCGGC AGTGCGACCG GAGCCGACAG TCTTGCCTTC
TTCGATGCCA TCGCGCCGAT CGTCTACCGC GACAGCATCG ACATGGGCGT GGCATGGATG
GCCTCGCGAT GGGACAAGGG CGCTGAAGCC TCGCTGGCGA TGGGCGGTGA CGGGCGCGAT
TACATCAACT GTCCAATGAC CCGAGACCAG TACCTCGCCT TCCGCGAAGA ACTGCTCGCC
GGCGAGAAGA CAGAGTTCAA GGAGTGGGAG GCAAACACTC CCTACTTCGA CGGCTGCATG
CCCATCGAGG TCATGGCCGC CCGCGGCGAA GAGACCTTGC GTTTCGGTCC GATGAAGCCT
GTCGGGCTCG ACAATCCCCA TTGGGCAACC GCGGAGCATC CGAACGGGCG TTGGCCCTAT
GCGGTGGTCC AACTCCGCCA GGACAACAAG CTTGGCACGC TGTGGAACAT GGTCGGCTTC
CAGACCAAGC TCAAGCATGC CGAACAAGTG CGCGTGTTCC GGACCATCCC GGGCCTCGAG
AATGCAGAGT TTGCCCGCCT CGGAGGCCTG CATCGCAACA CCTTCCTCAA TTCGCCGACG
CTTCTGGATC GCCAATTGCG CTTGAAGTCT GCTCCGAACG TTCGCTTCGC AGGGCAGATA
ACCGGATGCG AGGGCTACGT GGAGAGCGGC TCGGTCGGCA TGCTTGCCGG TTTGATGGTT
GCTGCACAGA TCGCTGGGCT CGACTGGTCC CCTCCCCCGC GCACCACGGC GCTCGGCGCG
CTGCTGGCGC ACATCACCGG CGATGCCGAA GCTGAGAGCT TCCAGCCGAT GAACGTGAAC
TTCGGCCTGT TTTCACCGGT AGACGCATCC GTGAAGAAGA AGGTTCGCAA GGAAGCATAC
ACTGCTCGGG CGAAGGCCGA TCTTTCGGAC TGGATAGCCA CGCTGGCGTA A
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| Protein sequence | MTHQVHIIGG GMAGTEAAWQ LARRGIRVRL SEMRGGGDTT PAHNGDGLAE LVCSNSFRSD
DDEKNAVGLL HYEMRQCDSL LMAAAAKARV PAGSALAVDR DVFSAEVEAA LRAQPTLEIV
RERVDVLPSD GLTIVATGPL TAPSLANSIG SATGADSLAF FDAIAPIVYR DSIDMGVAWM
ASRWDKGAEA SLAMGGDGRD YINCPMTRDQ YLAFREELLA GEKTEFKEWE ANTPYFDGCM
PIEVMAARGE ETLRFGPMKP VGLDNPHWAT AEHPNGRWPY AVVQLRQDNK LGTLWNMVGF
QTKLKHAEQV RVFRTIPGLE NAEFARLGGL HRNTFLNSPT LLDRQLRLKS APNVRFAGQI
TGCEGYVESG SVGMLAGLMV AAQIAGLDWS PPPRTTALGA LLAHITGDAE AESFQPMNVN
FGLFSPVDAS VKKKVRKEAY TARAKADLSD WIATLA
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