Gene Saro_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1909 
Symbol 
ID3917132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2021459 
End bp2022844 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content62% 
IMG OID640444655 
Productpyruvate dehydrogenase subunit beta 
Protein accessionYP_497183 
Protein GI87199926 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0434985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCG AACTGAAGAT GCCCGCGCTC TCCCCGACGA TGGAGGAGGG CACCTTGGCC 
AAGTGGCTCG TCAAGGCTGG CGACGAAGTC CGGTCCGGCG ACATTCTTGC AGAGATCGAG
ACCGACAAGG CCACGATGGA ATTCGAAGCC GTGGATGAAG GCGTGATCGC CGAAATCCTC
GTCGCCGAAG GCACCGAGGG CGTGAAGGTC GGCACCGTGA TCGCGACGAT CCAGGGCGAG
GGCGAGGATG CCGCACCCGC AGCGGCAACT CCTGCCGTTG AACAGAAGGT CGAAATGAGC
GAAGCCGCGC CAAGCGTCGA GGCCAGGGCC GCACCCGCAG TTGCGATCGC GCCGAAGGTC
GACGCAAAGC CGGCAGTAGA TCCTGAGATT CCCGCCGGCA CGGCGATGGT CCCGACCACC
GTTCGCGAAG CCCTGCGCGA CGCTATGGCC GAGGAAATGC GCGCCGACGA CCGCGTCTTC
GTGATGGGCG AGGAAGTGGC CGAGTACCAA GGTGCCTACA AGGTTACCCA AGGCCTGCTC
GATGAATTCG GTCCGCGCCG TGTGATTGAC ACCCCGATCA CCGAGTACGG TTTTGCGGGC
ATTGGCGCAG GCGCCGCGAT GGGCGGCCTT CGCCCGATCA TCGAATTCAT GACGTTCAAC
TTCGCCATGC AGGCGATCGA CCACATCATC AATTCGGCGG CCAAGACCAA CTACATGTCC
GGTGGCCAGA TGCGCTGCCC GATCGTGTTC CGTGGCCCCA ACGGCGCTGC AAGCCGCGTC
GGTGCACAGC ACTCCCAGAA CTACGGCCCG TGGTACGCCA ACGTTCCCGG GCTGGTTGTC
ATCGCGCCAT ATGACAGCGC CGATGCCAAA GGCCTGATGA AGGCTGCAAT CCGCAGTGAA
GACCCGGTGG TCTTCCTGGA AAACGAGCTT GTCTACGGAC GCACTTTCGA CGTGCCGCAG
ATGGACGACT TTGTACTGCC CATCGGCAAG GCGCGCATCG TCCGTCAGGG CAAGGACGTG
ACCATCGTAT CATATTCGAT CGGCGTCGGG CTTGCTCTTG AAGCGGCGGA GACTCTTGCC
GCAGAGGGTA TCGATGCCGA AGTGATCGAT CTTCGCACGC TGCGTCCGCT CGACAAGGAC
ACGGTGCTGG CCTCGCTTGC CAAGACGAAT CGTCTGGTTG TGGCGGAAGA AGGGTTCCCG
GTCTGCTCGA TTGCTTCGGA AATCATGGCA ATCTGCATGG AGGACGGGTT CGATCATCTC
GACGCACCGG TCCTGCGCGT ATGCGACGAA GACGTGCCAC TGCCTTATGC CGCCAACCTC
GAGAAGGCTG CGCTTATCGA TGCCGGCAAG ATCGCTGCGG CCGTGCGCAA GGTCTGCTAT
CGCTGA
 
Protein sequence
MAIELKMPAL SPTMEEGTLA KWLVKAGDEV RSGDILAEIE TDKATMEFEA VDEGVIAEIL 
VAEGTEGVKV GTVIATIQGE GEDAAPAAAT PAVEQKVEMS EAAPSVEARA APAVAIAPKV
DAKPAVDPEI PAGTAMVPTT VREALRDAMA EEMRADDRVF VMGEEVAEYQ GAYKVTQGLL
DEFGPRRVID TPITEYGFAG IGAGAAMGGL RPIIEFMTFN FAMQAIDHII NSAAKTNYMS
GGQMRCPIVF RGPNGAASRV GAQHSQNYGP WYANVPGLVV IAPYDSADAK GLMKAAIRSE
DPVVFLENEL VYGRTFDVPQ MDDFVLPIGK ARIVRQGKDV TIVSYSIGVG LALEAAETLA
AEGIDAEVID LRTLRPLDKD TVLASLAKTN RLVVAEEGFP VCSIASEIMA ICMEDGFDHL
DAPVLRVCDE DVPLPYAANL EKAALIDAGK IAAAVRKVCY R