Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1904 |
Symbol | |
ID | 3917125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2017265 |
End bp | 2018746 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640444648 |
Product | peptidase M48, Ste24p |
Protein accession | YP_497178 |
Protein GI | 87199921 |
COG category | [R] General function prediction only |
COG ID | [COG4784] Putative Zn-dependent protease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.429469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCATTTG CCCGCCGTTC GCGCGCCGCT TTCCTGACCG TCACCGCAAT CGTCGTCGCC GCATTGCCGG CGTGTGCCAG CCAGACCGGC AGTCCCGCAA CCGCGCAGGG CACGGCCCAG GCGATCAGTG CGGCTGACAG AAAGCAGGGG GCAGAAGCCC ATCCGCAGCT TCTTCAGGAA TTCGGCGGAG CGATGACCGG GCCGCAGGCT GCCTACGTCG AAACCGTGGG CAAGAACATC GCTGTCCAGT CCGGCCTCAG CAACGCGCGA GGCGATTTCA CGGTCACCCT GCTCAATTCG CCGGTCAACA ACGCCTTCGC GATTCCCGGC GGCTACGTTT ACGTCACACG CCAGCTCGCA GCGTTGATGA ACAACGAGGC AGAGCTTGCC GGCGTGCTCG GACACGAGGT TGGTCACGTT GCCGCAAGGC ACGCAGCCAA GCGGCAAAGC ACCGCAACGC GCAATTCCCT TCTCGGTGCG CTCGGCACGA TCCTTTCCGG GGCGATTCTC GGGAACAGTG CGCTGGGCCA GCTCGGCCAG CAGATTTTCT CGACCGGCAG CCAGCTACTG ACGCTGAAGT ATTCGCGCGG GCAGGAGACC GAGGCGGACA ATCTCGGCAT CACCTATCTC CAGCGTGCCG GATACGATCC GCGCGCGATG TCTACCGTTC TGCAGAGCCT GGCCAACCAG AATGCACTCG ACGCCAGCCT CAAGGGCACG TCGAACCAGG TTCCGGAGTG GGCCAGTACC CACCCGGATC CGGCCTCGCG CGTGCGCGCC GCGCTGACCC GGGCCGGTTC GACGCCGGGC CGCACGAATC GGGACGCCTT TCTCGCGGGG ATCAACGGCG TGACCTATGG CGATGACCCT GCGCAGGGCA TCGTCGATGG ATCGCGCTTC ACCCATCCGG GCTTCCGCAT GGCATTCCAG GCGCCAAACG GGTTCTATCT GGTAAACGGC ACCCGCGCTG TCTCGATCGC GGGGCAGAGC GGCAAGGGCG AACTGGCGAC CGCTACCTAC AGCGGCAATC TGTCGACCTA CGTAAAGACG GTGTTCGCCG GCCTTTCCAG CCAGCAGCAG CTTCAGCCGG ATTCGATTCA GACGACGACG GTGAATGGCA TCCCGGCAGC CTTTGGCACC GCCCGCGTCA ACAGCGGCAA TGGTCAGGTC GACGTTGTCG TCTTCGCCTA TGAATGGGGG CCGCAGCAGG CGTTCCATTT CTCAACGATC AGCCAGGCCG GGCAGTCGGG GCAGTTCGAT TCGATGTTCC GTTCGATGCG GCGGATCAGC GCCAGCGAAG CGACTGCGGT CAAGCCGCGC AAGCTTTCGG TCGTGACTGT AAGGTCGGGC GACACCCTGC AGAGCCTGGC GAGCAGGATG GCCTATACCG ACAAGCCGAT GGAACGTTTC CTCGTGCTCA ACGGGCTCAC CTCGTCGAGC AGGCTGACGG CGGGGCAGAA GGTCAAGCTA GTGGTCTATT GA
|
Protein sequence | MPFARRSRAA FLTVTAIVVA ALPACASQTG SPATAQGTAQ AISAADRKQG AEAHPQLLQE FGGAMTGPQA AYVETVGKNI AVQSGLSNAR GDFTVTLLNS PVNNAFAIPG GYVYVTRQLA ALMNNEAELA GVLGHEVGHV AARHAAKRQS TATRNSLLGA LGTILSGAIL GNSALGQLGQ QIFSTGSQLL TLKYSRGQET EADNLGITYL QRAGYDPRAM STVLQSLANQ NALDASLKGT SNQVPEWAST HPDPASRVRA ALTRAGSTPG RTNRDAFLAG INGVTYGDDP AQGIVDGSRF THPGFRMAFQ APNGFYLVNG TRAVSIAGQS GKGELATATY SGNLSTYVKT VFAGLSSQQQ LQPDSIQTTT VNGIPAAFGT ARVNSGNGQV DVVVFAYEWG PQQAFHFSTI SQAGQSGQFD SMFRSMRRIS ASEATAVKPR KLSVVTVRSG DTLQSLASRM AYTDKPMERF LVLNGLTSSS RLTAGQKVKL VVY
|
| |