Gene Saro_1895 details

Gene Information

• Locus tag: Saro_1895
• ID: 3917116
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 2007263
• End bp: 2009083
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640444639
• Product: phosphogluconate dehydratase
• Protein accession: YP_497169
• Protein GI: 87199912
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.488647
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGATGA ACCCAACTGT CGAGCGCGTC ACCCAGCGCA TCATCGAGCG TTCGCGCAGC 
ACCCGCGCCG CATATCTCGA TCTTGTGGAA CGTTCGCGCG ACCAGGGGCT CAACCGGCCC 
AGGCTTTCGT GCGGCAACCT GGCCCACGGC TTTGCCGCAT CGGGCGAGGA CAAGCCGGCG 
ATCAAGTCGG GCAAGGCGAT GAACATCGGC ATCGTCACTG CCTACAACGA TATGCTTTCG 
GCGCATCAGC CGTATGGCCG CTATCCCGAG CAGATCAAGA TATTCGCCCG GGAAGTGGGC 
GCGACGGCGC AGGTTGCAGG CGGCGTTCCA GCGATGTGCG ATGGCGTCAC GCAGGGCCAG 
GATTCGATGG AGCTGTCGCT CTTCAGCCGC GACGTGATCG CAATGGCGAC GACAGTCGGG 
CTAAGCCACG CCATGTTCGA AGGCGCGCTC CTGCTCGGAA TCTGCGACAA GATCGTGCCC 
GGGCTGCTGA TCGGCAGCCT GCGCTTTGGC CACCTGCCGA CCATTCTCGT GCCGGCGGGC 
CCCATGCCGA CAGGCCTTCC CAACAAGGAG AAGGTCCGTA TCCGCCAGCT ATATGCAGAG 
GGCAAGGTCG GTCGCGACGA ACTGCTCGAA AGCGAGAGCG CCAGCTATCA CTCCGCCGGC 
ACGTGCACCT TCTATGGCAC GGCCAACTCC AACCAGATGA TGATGGAGAT GATGGGGCTG 
CACATGCCCG GCTCCAGCTT CGTCCTGCCC GGCACGAAGA TCCGTCAGGA ACTGACGCGG 
GCGGCGACGC ATCGCATCGC CCAGATTGGT TGGGATGGCG ACGATTATCG TCCTCTCGGC 
AGGTGCGTCG ACGAGAAGGC CATCGTCAAT GCGATCGTCG GCCTGCTGGC AACAGGTGGC 
TCGACCAACC ACGTGATCCA CCTGCCGGCC ATCGCGCGGG CCGCCGGCAT CCAGATAGAC 
TGGAACGACA TGGACGACCT GTCGCGCGTC GTCCCGCTTA TCGCCAGCGT CTATCCCAAT 
GGCGCGGGCG ACGTGAACTA CTTCGCAGCG GCGGGCGGCA TGCCCTATGT GATCCGCGAG 
CTGATCGGGT CCGGCCTTGC CCATCCGGAT ATCCTGACGG TCTACGGCCA GTCGCTGGAG 
GAAGGCGCCC AGCAGCCTGT CATGGAAGGC GACAACCTGC GCTGGGATCC GGCGCCCGAG 
GTTTCGGGAG ACGACAGCAT GCTGCGCCCT GTTTCGGCGC CGTTCCAGCC CGAAGGCGGC 
TTCAGGTTGC TGAAAGGCAA CCTCGGCCGG GGTACGATCA AGGTCAGCGC GGTCGATCCC 
TCACGCTGGA CGATCGAGGC GCCTTGCCGG GTGTTCGAGG ACCAAAATGC CGTGCTCGAC 
GCGTTCAAGG CCGGCGAACT GGAGCGTGAC GTCATCGTTG TCGTACGCTT CCAGGGGCCT 
GCCGCAAACG GCATGCCCGA ACTGCACAAG CTGACCCCGC CGCTTGGCGT CCTGCAGGAT 
CGCGGGTTCA AGGTCGCGCT CGTCACCGAT GGCCGTATGT CGGGCGCTTC GGGCAAGGTG 
CCTGCCGCAA TCCATGTCTC GCCCGAAGCC AAGCTCGGTG GCCCGCTGGC AAGGCTGCGC 
GACGGCGACG TGGTGCGGGT ATGCGCCAAC AGCGGCGAGC TTGTCGCGGT CGTGCCCGCC 
GAGGAGTGGA GCGCGCGCGA GGAAGCAGTT GCCCCGGCTA GTGCTCCCGG CGTAGGCCGC 
GAACTCTTCG CGCTCATGCG GCAGCATTCC GATCCCGCCG AGCGCGGCGG ATCGGCGATG 
CTCGCGGCGG CGGGGCTCTG A 

 

Protein sequence

MAMNPTVERV TQRIIERSRS TRAAYLDLVE RSRDQGLNRP RLSCGNLAHG FAASGEDKPA 
IKSGKAMNIG IVTAYNDMLS AHQPYGRYPE QIKIFAREVG ATAQVAGGVP AMCDGVTQGQ 
DSMELSLFSR DVIAMATTVG LSHAMFEGAL LLGICDKIVP GLLIGSLRFG HLPTILVPAG 
PMPTGLPNKE KVRIRQLYAE GKVGRDELLE SESASYHSAG TCTFYGTANS NQMMMEMMGL 
HMPGSSFVLP GTKIRQELTR AATHRIAQIG WDGDDYRPLG RCVDEKAIVN AIVGLLATGG 
STNHVIHLPA IARAAGIQID WNDMDDLSRV VPLIASVYPN GAGDVNYFAA AGGMPYVIRE 
LIGSGLAHPD ILTVYGQSLE EGAQQPVMEG DNLRWDPAPE VSGDDSMLRP VSAPFQPEGG 
FRLLKGNLGR GTIKVSAVDP SRWTIEAPCR VFEDQNAVLD AFKAGELERD VIVVVRFQGP 
AANGMPELHK LTPPLGVLQD RGFKVALVTD GRMSGASGKV PAAIHVSPEA KLGGPLARLR 
DGDVVRVCAN SGELVAVVPA EEWSAREEAV APASAPGVGR ELFALMRQHS DPAERGGSAM 
LAAAGL