| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1893 |
|---|
| Symbol | |
|---|
| ID | 3917114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 2005196 |
|---|
| End bp | 2006644 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640444637 |
|---|
| Product | glucose-6-phosphate 1-dehydrogenase |
|---|
| Protein accession | YP_497167 |
|---|
| Protein GI | 87199910 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.674127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGT CCAGCTGTTC CGCACTGCTG CTGTTCGGCG CGACCGGCGA CCTTTCCCGC
CGGATGCTTC TGCCTTCGCT CTACGCCCTT CACGAAGACG GCCTGATCCG GCCGGACCTG
CGCATCGTGG GCACGGCCCG GTCCGAGCAT GACGACGCCG AGTTCCGCGA ATTCGCCCGC
GAGGCGCTTG CCGAATTCCT GCCCGAGGAC CGGCGGGACG AGGAAAAGCT CGCGAGTTTC
CTCGAACGGC TCGAATACCA GACCCTCGAT GCCTCGAATG TCGATGGCTT CGGCGAACTG
GCCCGCAAGC TGGGCGACAC CTCGTGCGGC CTCTCGATTT TCCTGTCCAC CGCGCCGTTC
CTGTTCGAAC CGACGATCGA AGGCCTGCGC CGGGCGGGCT TGGCCCATGA GAACGTGCGG
ATCGGCCTTG AAAAGCCGCT CGGGAACGAC CTTGCATCGT CCACCCGTAT CAACGATGCG
GTTGCCGCCG CCTTTGCCGA GGAACAGATC TTCCGGATCG ACCATTACCT TGGCAAGGAA
ACGGTCCAGA ACCTCATGGC ACTGCGCTTT GCCAACATGA TGTTCGAGCC GTTGTGGAAC
GCAGGCGGTA TCGACCATGT GCAGATCACG GTTAGCGAGA CGGTCGGCCT CGAAGGGCGC
AAGGGCTTCT ACGACGACAC CGGCGCACTG CGCGACATGG TGCAGAACCA CATGCTCCAG
TTGCTCGCCC TGACCGCAAT GGAGCCGCCG GCAAGCCTCG ACGCCACGTC GATCCGCGAC
GAAAAGGTCA AGGTCCTGCG CGCGCTTCGC CCGGTCAAGG CGGAGGAAAT GGTGCGGGGC
CAGTACCGCG CCGGGGCGGT GAAGGGCACG TCGGTCACCG GATACCAGGA AGACCTTGGC
GAAGTGTCCG ACACGGAGAC CTTCGTGGCG ATCAAGGCCC ATGTCGACAA CTGGCGTTGG
ACCGGCGTGC CGTTCTACCT GCGCACCGGC AAGCGACTTG GCGAGCGGCG CAGCGAGATC
GTGGTCGAGT TCAAGCCTGT TCCGCACAAC CTCTTTGCCG AGCGCGGGGG AAGGCTTCGC
CCCAACCGCC TCGTCATCCG CCTCCAGCCC GAGGAATATG TGCGGCTGCA GGTGATGGCG
AAGGAGCCGG GGCTCGACCG TGGCGGTATT GTGCTGCGCG ACGTCAATCT CGACCTTTCG
TTGACCGCAG CCTTCGCCAA GGCGCGCCGC CGCATTGCCT ACGAACGCCT GCTGCTCGAC
CTGATCGAGG GCGAACAGAC CTTGTTCGTC CGGCGAGACG AAGTGGAAGC GCAGTGGAAG
TGGGTCGACG CCATCCGCAA GGTCTGGGCC GACACCGACA TGGAAGCCAA GCCCTATGCC
GCAGGAAGCT GGGGGCCGAA CGCAGGCATC GCCCTTACCG AGCGGGACGG GAGAAGCTGG
AATGACTGA
|
|---|
| Protein sequence | MIESSCSALL LFGATGDLSR RMLLPSLYAL HEDGLIRPDL RIVGTARSEH DDAEFREFAR
EALAEFLPED RRDEEKLASF LERLEYQTLD ASNVDGFGEL ARKLGDTSCG LSIFLSTAPF
LFEPTIEGLR RAGLAHENVR IGLEKPLGND LASSTRINDA VAAAFAEEQI FRIDHYLGKE
TVQNLMALRF ANMMFEPLWN AGGIDHVQIT VSETVGLEGR KGFYDDTGAL RDMVQNHMLQ
LLALTAMEPP ASLDATSIRD EKVKVLRALR PVKAEEMVRG QYRAGAVKGT SVTGYQEDLG
EVSDTETFVA IKAHVDNWRW TGVPFYLRTG KRLGERRSEI VVEFKPVPHN LFAERGGRLR
PNRLVIRLQP EEYVRLQVMA KEPGLDRGGI VLRDVNLDLS LTAAFAKARR RIAYERLLLD
LIEGEQTLFV RRDEVEAQWK WVDAIRKVWA DTDMEAKPYA AGSWGPNAGI ALTERDGRSW
ND
|
|---|
| |