| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1891 |
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| Symbol | |
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| ID | 3917112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 2001334 |
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| End bp | 2002968 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640444635 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_497165 |
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| Protein GI | 87199908 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.687574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGA CCGAAACAGC CATTGCCGAC CCCAAAATGC ACACGGAGAC GCCGTGGTGG
CGCGGTGCGG CGATCTATCA GATCTATCCA CGCAGCTTTT GCGATTCCAA CGGCGACGGC
ATCGGGGACC TGAATGGCAT CGCCTCGCGA CTGGATCACG TCGCGCGCCT TGGCGTAGAC
GCGATCTGGA TCTCGCCGTT CTTCACCTCG CCGATGAAGG ACTTCGGCTA CGACGTCGCC
GACTACTGCG ACGTCGATCC GATCTTCGGG ACGCTGGCGG ATTTCGATGC CCTGGTAAAA
CGCGCGCACG AGCTGGGCCT CAAGGTCACG ATCGACCAGG TCTATGCGCA TACCTCGGAC
ATTCATCCGT GGTTTGCCGA AAGCCGGCAG GACCGTACCA ACGCCAGGGC GGACTGGTAT
GTCTGGGCCG ATCCTAAGCC CGATGGGTCG CCCCCGTCGA ACTGGCAGTC GGTATTCGGC
GGTCCGGCAT GGACGTGGGA TGCGCGGCGC TGCCAGTATT ACCTGCACAA CTTCCTATCC
AGCCAGCCCC AGGTAAACGC CCACAATCCC GAAGTGCAGG AAGCGCTGCT CGGGGCGATG
AAGTTCTGGC TGGACCGGGG TGTTGACGGC TTCCGCCTCG ATGCCCTGAA CTTCCTGATG
CATGACCCGA CCTTGCGGGA CAATCCGCCG GCGCCGGACG ATGGCCGACG CAAGACGCGG
CCATTCGACT TCCAGCTCAA GATCTACAAC CAGTCGCACC CCGACATCCT GAAGTTCATC
CAGCGGGTGC GGAACCTGTG CGACGACTAT GGCGCGGTGT TCACAGTCGC GGAAGTCGGC
GGAGACCTTG CCGAGACGGA GATGAAGGCG TTCACTGCGG GGGACAGGCA TCTCAACAGC
GCCTACGGCT TCGACTTCCT CTACGCGGAC AGGCTGACGC CGCATTTCGT GGAAAAGGCC
GTGGCCAAAT GGCCCGATGC ACCCGGCATG GGCTGGCCGA GCTGGGCCTT CGAGAACCAC
GATGCGCCGC GCGCGCTTTC GCGCTGGTGC GCGCCGGACC AGCGCGAGCC GTTCGCCCGG
CTGAAGGCCA TGCTCTTCGC TTCGTTGCGG GGGAACATCA TCGTCTACCA GGGCGAGGAA
CTGGGACTGA CGCAGGTCGA CATTCCGTTC GAGCAGTTGC AGGACCCCGA GGCCATCGCC
AATTGGCCGC TGACGCTTTC ACGCGACGGT GCACGCACGC CGATGCCCTG GTTAGTACAA
TCGGGCGAGG GCGGGTTCAC GTCGGGCGCG CCCTGGTTGC CGCTGGGCGA GGAAAACCTG
TCGCGGGCCG TCGACCGGCA GGAAGGCGAT CCGGCATCGC TCTTGAACCT GACCACGCGC
CTGCTTCGCC TGCGCCGCGA GACGCCCGCG TTACGGATCG GTTCCTTCGA GGTGATCCAT
GCAGACGAAT GCCTTCTTGC CATTCGGCGC GTTTTGGGTG AGCAATCGAT TGCAGGGCTG
TTCAACCTGT CCTCCGTCCC GGTGGTCTGG CCCCACGGGC TGGTGCGGGA GGGCAAGGAA
ATGGCGTCGG TCAACGGCGC GACAGTGGGG CAGTTGCCGC CGTTCGGCGC GCTCCTGATC
GAAGAGAGGA TCTGA
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| Protein sequence | MKQTETAIAD PKMHTETPWW RGAAIYQIYP RSFCDSNGDG IGDLNGIASR LDHVARLGVD
AIWISPFFTS PMKDFGYDVA DYCDVDPIFG TLADFDALVK RAHELGLKVT IDQVYAHTSD
IHPWFAESRQ DRTNARADWY VWADPKPDGS PPSNWQSVFG GPAWTWDARR CQYYLHNFLS
SQPQVNAHNP EVQEALLGAM KFWLDRGVDG FRLDALNFLM HDPTLRDNPP APDDGRRKTR
PFDFQLKIYN QSHPDILKFI QRVRNLCDDY GAVFTVAEVG GDLAETEMKA FTAGDRHLNS
AYGFDFLYAD RLTPHFVEKA VAKWPDAPGM GWPSWAFENH DAPRALSRWC APDQREPFAR
LKAMLFASLR GNIIVYQGEE LGLTQVDIPF EQLQDPEAIA NWPLTLSRDG ARTPMPWLVQ
SGEGGFTSGA PWLPLGEENL SRAVDRQEGD PASLLNLTTR LLRLRRETPA LRIGSFEVIH
ADECLLAIRR VLGEQSIAGL FNLSSVPVVW PHGLVREGKE MASVNGATVG QLPPFGALLI
EERI
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