| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1884 |
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| Symbol | |
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| ID | 3917105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1989933 |
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| End bp | 1991255 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640444628 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_497158 |
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| Protein GI | 87199901 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00690154 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACCCC TGTACCATTA CGCGCCCGCC GCCAACTGGC TGAGCGACCC CAACGGCCTC
GTGTGGCAGG ATGGGGAGTG GCACCTGTTC TACCAGTACA ATCCCTTCGG CGAGGACTGG
GGGCACATGT CCTGGGGCCA CGCGGTCAGT CGCGATCTTG TGACTTGGCA GGAACTGCCG
GTGGCTCTTG CCGAAGAAGA CGGGACGATG ATCTTCTCGG GATCTGCAGT CATCGATCAC
CAGGGCAGCG CGGGCTTCGG AAAGGGCGCG ATGGTCGCGG TCTATACCGG CGCGCGAACC
GACCGGGCGC ATCAGTTCCA GAGCATTGCC GCCAGCACGG ACCGGGGGCG CACTTTCACC
AAGTTCACGG GCAACCCGGT GCTCGACCTG CAAATGGCGG ACTTCCGCGA TCCGAACGTG
TTCTGGCACG GGCCGTCGGG CCGGTGGATC ATGTCGGTCG TGCTTTCGGA GGAGAACCGC
GCGCAATTGT ACGCTTCGGT GGACTTGAGG CACTGGGATC TGCTGTCCGA TATTGGGCGC
GACGGTGCGC CCGGGCACTT GTGGGAATGC CCCTGGATGG TCGAGTTGCC GGTGGAGGGC
ACCGACGAGA CACGTTGGCT GTTCAAGGTC GATGTCCTGT CCGGCGCGGC AGGCCAGGCA
TCGCCGTGGC GCGTGGGGCA TTTCGACGGA AGGCGGTTCG TTCCGGAGAC CGGTTGGGCG
GTGGGTGACC ACGGGCCTGA CTTCTATGCG GCAATCGGTT GGAACGCCGC CCCGGATGCG
GAAGGACGAC CCGTCTGGAT CGGATGGGCG GGCAATCACG CCTATCAGAA GTACCTCGAG
CCGCAGGGCT GGCGCGGCGC GATGACGCTG CCGCGCCGTG TCTCGCTTCG CCGTGACGAA
AGTGGCTACG CGCTGGTGCA GGAAGTGGAA CCGGCCTGCC GCGCTCTGTT CGGCAAGGCC
GAGGCCACGT CGCTGTGCGA TGGGTGCATC CCGCTGCCGT CAGCGGCGCT GCTGAGCTTT
CCGGCCGGCA AGGACTGGTC CTTCAGGATC GAGGACGATC ATGGGCGCAG CATCGAGTGC
GCGCTCTCGG GGGGGCGGCT GACCGTGCGC CGACACGACC CGGTGACGCC GCAGCTCGAA
CATCGCGCGG CGATGGAAGC AGGGAAGGGC CCTGTCGAAC TGTGGCTCGA TGCAGGCAGC
CTTGAGGTCT TCGCGAACCG GGGCGGGGCA GTTCTGACGT TGCAGCATCG CCTCGCCGGC
GAGGCCTGGG CCTTGCGCGG CGAGGGCGCG TGCAGCGTGG CCTATCCCGC CGCGATGGCC
TGA
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| Protein sequence | MRPLYHYAPA ANWLSDPNGL VWQDGEWHLF YQYNPFGEDW GHMSWGHAVS RDLVTWQELP
VALAEEDGTM IFSGSAVIDH QGSAGFGKGA MVAVYTGART DRAHQFQSIA ASTDRGRTFT
KFTGNPVLDL QMADFRDPNV FWHGPSGRWI MSVVLSEENR AQLYASVDLR HWDLLSDIGR
DGAPGHLWEC PWMVELPVEG TDETRWLFKV DVLSGAAGQA SPWRVGHFDG RRFVPETGWA
VGDHGPDFYA AIGWNAAPDA EGRPVWIGWA GNHAYQKYLE PQGWRGAMTL PRRVSLRRDE
SGYALVQEVE PACRALFGKA EATSLCDGCI PLPSAALLSF PAGKDWSFRI EDDHGRSIEC
ALSGGRLTVR RHDPVTPQLE HRAAMEAGKG PVELWLDAGS LEVFANRGGA VLTLQHRLAG
EAWALRGEGA CSVAYPAAMA
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