| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1877 |
|---|
| Symbol | |
|---|
| ID | 3917098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1978421 |
|---|
| End bp | 1979797 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640444621 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_497151 |
|---|
| Protein GI | 87199894 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGGCA TCAATGCAAA TCGACCGCAC CTGCCGCTGG CAAGGATACT CGAGATGAAT
CTCGGATTCC TGGGCCTGCA ATTCAGCTTC GGGCTGCAGC AGGGCAACAT GGGGCCGATA
TACAGCTATC TGGGTGCCGA CGAATCCCAG CTCCCCATGC TCCAGCTTGC CGGGCCTATC
ACGGGGCTCC TCGTCCAGCC GATCATCGGC GCGATGAGCG ACCGGACCGC CAGCCGATGG
GGCCGGCGCA CACCCTATTT CCTGATCGGT GCCGTGCTGT GCGCATTCGG CCTGTTCTTC
ATGCCGCTGT CGAGCTCGAT CCTGATGGCA ATGTCGCTGT TATGGATCCT CGACGCGGGC
AACAACATCA CCATGGAGCC GTACCGGGCA TATGTCTCCG ACCGGCTGAA CCCGGAACAG
CGTCAGGCGG GTTTCCTGTC GCAGAGCGCA TTCACCGGCC TTGCCCAGAT GCTGGCCTTT
CTCACGCCCT CGCTGCTGGT CGGCCTTGGC ATGAACCAGG ACTGGGTCGA CAGCCACGGC
ATCCCCTACA CCGTGCGCAT CGTGTTCATG ATCGGCGCTG TCCTTTCGCT CAGCACGATT
CTTTGGTCCG TTCTTCGCGT TCCCGAACTG CCGCTGACGC CGCAGGAGCG CGCCCACATC
CAGGCACAGC CCAAGGGCGC TTGGGCCACC CTGCGTGAGA TCGGCGAAGC GATTGCCGAC
ATGCCCGTCG CGATGCGCAA GCTCGGCCTG ATGAGCCTGT TCCAGTGGGT CGGCATGTCC
GGGTACTGGA CCTACGCGGT CTATTCGATC AGCCGCACCG TCTATGGCAC GTCGGACGTC
CATAGCAGCG CCTTCCATAC CGCCGTTCTG ACCAATGGCG AGGTTGCCGC ATTCTACAAT
GCGATATCCT TCGTCACGGC CTTTGCCATG GTGCCGCTGG TCAGGCGCCT TGGGCCCGGA
CCGCTGCATG CCCTGTGCCT GTTCGCTGGC GGGGTGGGGA TGTTCCTCCT GCCCAACGTC
ACCGACAAGG CTTTGCTATT CCTGCCGGCC ATCGGCATCG GCCTCGCCTG GGGGAGCATC
ATGGGCAATC CCTATGCGAT CCTGACCAAT TCGATCCCGC CCCAGCGCAC TGGGGTCTAC
ATGGGCATCT TCAACATGAT GATCGTGATC CCGATGCTGA TCTTCGCGGT GGTGATGAGC
AGACTCGACC TGGGCTTCGT CTCGCTCGGC TTCGACGCGT ACAAGCAGGT CCTCGGCGGC
GATCCCCGCA ACATGCTGAT GTTTTGCGGC GCGTCGCTGG TGCTCGCGGG CTTCTCGGTG
CTCTGGGTGC GCGAAGGACG AGCCGGCGCG ATGCCGCAAT CGGCGGTGCC GGCCTGA
|
|---|
| Protein sequence | MNGINANRPH LPLARILEMN LGFLGLQFSF GLQQGNMGPI YSYLGADESQ LPMLQLAGPI
TGLLVQPIIG AMSDRTASRW GRRTPYFLIG AVLCAFGLFF MPLSSSILMA MSLLWILDAG
NNITMEPYRA YVSDRLNPEQ RQAGFLSQSA FTGLAQMLAF LTPSLLVGLG MNQDWVDSHG
IPYTVRIVFM IGAVLSLSTI LWSVLRVPEL PLTPQERAHI QAQPKGAWAT LREIGEAIAD
MPVAMRKLGL MSLFQWVGMS GYWTYAVYSI SRTVYGTSDV HSSAFHTAVL TNGEVAAFYN
AISFVTAFAM VPLVRRLGPG PLHALCLFAG GVGMFLLPNV TDKALLFLPA IGIGLAWGSI
MGNPYAILTN SIPPQRTGVY MGIFNMMIVI PMLIFAVVMS RLDLGFVSLG FDAYKQVLGG
DPRNMLMFCG ASLVLAGFSV LWVREGRAGA MPQSAVPA
|
|---|
| |