Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1866 |
Symbol | |
ID | 3917087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1966737 |
End bp | 1968014 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640444610 |
Product | major facilitator transporter |
Protein accession | YP_497140 |
Protein GI | 87199883 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.591814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGACG ACCACATGGG CGATGCCGGA CAGGGTACCG GCGCCGGACA GGCAAGGGGG AAGGGCTACC AGATCTGGGT GACCGCCCTG CTCAGCCTCA ACTTCGGCAT CCTGTTCTTC GACCGCAACG CGGTGAACTT CCTCATGCCG TTCGTGCAGC CGGACCTGAA GCTGACCAAT ACCCAGGTCG GCATGTTCAG TTCCGCCCTG TCGCTGACAT GGGCGCTTTC GGGGCTTTTG GTCGGGCGGA TATCGGACAA GCTGGGGTCG AAGAAGCCAG TCGTCGTGAT CGCGACGATC GCATTCTGCC TGTGCTCGTT CATCTCAGGC GCGGCCTCGT CATTCCTGAT GCTTCTGGGG GCGCGCCTCC TGATGGGCGC GGCGGAAGGC GGCGTGATGC CGGTCAGCCA CGCGATGATC GTTTCGGAAG TCGCGCCCGA ACGCCGTGGG CTTGCCATGG GCGTCGCGCA GAACCTCGGG TCGAACCTGC TGGGCTCGGG CCTCGCGCCG ATCCTGCTGG TCCCGGTCGC GGCGGCAGTG GGCTGGCGGA CGGGTTTCTA TCTTGCCGCC CTGCCGGGCC TCGTCACGGC GGCGCTTATC TGGTTCACCC TGCGTGAGCC GCCGGCCGAG GTCCATGACG AGGCGACGCC CAAGGTGACG CTGCGCGAGG CCTTCGCCCA CCGCAACGTG ATCCTGTGTG CGCTGATCGC GATCCTGCTC GTGTCATACC TCGTCGTGTG CTGGGCATTC ATGCCTCTCT ACCTGACCAA GGCACGCGGC TTCGCGCCCG AGACGATGGG CTGGCTGATG GCCACGCTGG GGATTTCGGC GGGTATCGGC AGCTTCGTGG TGCCGGCCAT TTCCGATGCC ATCGGACGGC GTCCCGTCAT GATCTTCTTC TCGTTCCTGG GCGTCATCCT TCCACTCGGC GCGCTGTACT ACCAGGGCTC GACGCTGGTG CTGGCCGCGA TCTTCTTCAT CGGATGGGGC CTGAACGGTC TGTTTCCGAT GTTCATGGCG ACCATCCCGG CGGAATCGGT GGACCCGCGC CTGACGGCGA CGCTGACCGG CGTCGTCATG GGCACGGGCG AGGTGCTTGG CGGCGTGCTG AGCCCGTTCT TCGCAGGCGC GCTGGCCGAC TCCTACGGCC TTTCGGCTCC GCTCTGGCTG ATGCTGGTGT GCACGGTTCT GGCGGGGATG CTGACGCTGG GACTGATCGA ATCCGCACCG CGCGTGGTGG CGCGGCGCCT AACCCCGGCC TTGGCAGCCG GGACCTGA
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Protein sequence | MRDDHMGDAG QGTGAGQARG KGYQIWVTAL LSLNFGILFF DRNAVNFLMP FVQPDLKLTN TQVGMFSSAL SLTWALSGLL VGRISDKLGS KKPVVVIATI AFCLCSFISG AASSFLMLLG ARLLMGAAEG GVMPVSHAMI VSEVAPERRG LAMGVAQNLG SNLLGSGLAP ILLVPVAAAV GWRTGFYLAA LPGLVTAALI WFTLREPPAE VHDEATPKVT LREAFAHRNV ILCALIAILL VSYLVVCWAF MPLYLTKARG FAPETMGWLM ATLGISAGIG SFVVPAISDA IGRRPVMIFF SFLGVILPLG ALYYQGSTLV LAAIFFIGWG LNGLFPMFMA TIPAESVDPR LTATLTGVVM GTGEVLGGVL SPFFAGALAD SYGLSAPLWL MLVCTVLAGM LTLGLIESAP RVVARRLTPA LAAGT
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