| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1862 |
|---|
| Symbol | |
|---|
| ID | 3917083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 1962769 |
|---|
| End bp | 1963989 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640444606 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_497136 |
|---|
| Protein GI | 87199879 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5441] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0341328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA AGCCCAGCGT CCTGTTCATC TGCACGCAGG ATACCGAGGA AGAGGAAGCC
CGCTTCACCC GCGCCGCGCT CGAGGCGGCG GGCGTCGAAG TCGTCCACCT CGATCCCAGT
GTCCGCCGCT CGCTCGGCGG GGCGGAAATC TCGCCGGAAA TGGTCGCCCA GGCCGGCGGA
ATGACCATCG AGGAAGTCCG CGCCCTCGGC CACGAAGGCA AGTGCCAGGA CGCGATGATC
CGTGGTGCCA TCGCCGCCGC GCACGAATGG GACGCCAGAC ACCCCGTCTC CGGCATTCTC
GCGGTCGGCG GCTCGATGGG CTCGGCGCTT GCCGGTGCGC TCATGCAGAG CTTCCCCTAT
GGCCTGCCCA AGCTGATCGT CTCGACCATG GCCTCGGGCT TCACCAAGCC CTACATGGGC
GTGAAGGACA TCGCGATGAT GAACGCGGTG ACCGATATCT CGGGCATCAA CACGATCAGC
CGCGACGTCT TCCGCAACGC TGCCAACGCC GTTGCCGGAA TGGCGAAGGG CTACGACCGC
GACAAGGGCC CCGAAAAGCC TCTCGTCCTC ATCACCACGC TCGGCACGAC GGAAACCAGC
GTGAAACGCA TCCGCCAGGC ACTGGAAAGC GATGGCTGCG AAGTCATGGT CTTCCATTCC
TCCGGCGCGG GCGGCCCCAC GCTCGACGGG CTCGCCGCCG ACAAGGACGT GGCGCTGGTC
CTGGACCTTT CCCCGACCGA GATCCTCGAC CACCTCTTCG GCGGCCTGGC TGATGCCGGT
CCGGATCGCG GGCGCGCGGC CCTGCGCAAG GGCATCCCGA CGATCCTTGC CCCCGGCAAT
GCCGATTTCA TCATCGGCGG TCCGATCGAC GCCGCGGAAG CGCAGTTTCC AGGCCGGCGC
TACCACCAGC ACAACCCGCA GCTCACCGCA GTCCGCACCA ACGTCGCGGA CCTTCGGAAG
CTGGCCGATC ACCTTGCCGC CAACGTGCGC GAGGCCAAGG GCCCGGTCCG GGTCTTCACC
CCGCTCAAGG GCTTTTCCAG CCACGACAGC GAAACGGGCC ACCTGCTCGA CCTCTCGGTG
CCGGGACCCT TCGCCGAATA TCTCGCCAGC GTCATGCCAG GTCACGTGCC GGTGACCGCC
GTGGACGCCC ATTTCAACGA CGAAGCCTTC TCCAGCGCGG TCATTGCCGC CGCGCGCGAG
ATGCTTGCCG CAAAGAACTG A
|
|---|
| Protein sequence | MTDKPSVLFI CTQDTEEEEA RFTRAALEAA GVEVVHLDPS VRRSLGGAEI SPEMVAQAGG
MTIEEVRALG HEGKCQDAMI RGAIAAAHEW DARHPVSGIL AVGGSMGSAL AGALMQSFPY
GLPKLIVSTM ASGFTKPYMG VKDIAMMNAV TDISGINTIS RDVFRNAANA VAGMAKGYDR
DKGPEKPLVL ITTLGTTETS VKRIRQALES DGCEVMVFHS SGAGGPTLDG LAADKDVALV
LDLSPTEILD HLFGGLADAG PDRGRAALRK GIPTILAPGN ADFIIGGPID AAEAQFPGRR
YHQHNPQLTA VRTNVADLRK LADHLAANVR EAKGPVRVFT PLKGFSSHDS ETGHLLDLSV
PGPFAEYLAS VMPGHVPVTA VDAHFNDEAF SSAVIAAARE MLAAKN
|
|---|
| |