Gene Saro_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1800 
Symbol 
ID3918359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1897735 
End bp1898328 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content68% 
IMG OID640444541 
Productacyl-phosphate glycerol-3-phosphate acyltransferase 
Protein accessionYP_497074 
Protein GI87199817 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.428645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTGCG GCGTGGAAAC GCTCTTGCCT CTTGTCGTCG GCTATGTTCT GGGCTCGGTG 
CCCTTCGGCC TCATTCTCAC CCGCCTGACC GGCGCCGGCG ACTTGCGCGC CATCGGTTCG
GGCAACATCG GCGCGACCAA CGTGCTGCGC ACCGGCAAGA AGGGCCTTGC CGCGGCAACG
CTGCTGCTCG ACCTGGGGAA GGGGCTTGCC GCAGTGCTGA TCGTCCGCCA CGTGTGGCCC
GGGGCAGAGG CACTGGCCGC GCTCGCAGCT GTGCTGGGCC ACTGTTTCCC GGTCTGGCTG
CGGTTCAAGG GCGGGAAGGG CGTGGCAACG CTCATGGGCG TGTCGCTTGC TCTCGCCTGG
CCGATCGGCC TGGTCTATGC CGTCACATGG CTCGGCGTCC TGTTCTTGAG CCGCATCTCC
TCGCTCGGGG GGATGAGTGC GGCGGTCGTC GCGCCCGTGG CGGCGGCGGT GCTCGGATAC
GCACCCTACG TTCCGGTTCT CGCGCTGCTG GCTCTCCTCG TGCTGTATCT GCACCGGGAA
AACATTGCCC GCCTTCGCGC CGGAACCGAA CCGAAGGTCG GCAGCAGGAA GTGA
 
Protein sequence
MECGVETLLP LVVGYVLGSV PFGLILTRLT GAGDLRAIGS GNIGATNVLR TGKKGLAAAT 
LLLDLGKGLA AVLIVRHVWP GAEALAALAA VLGHCFPVWL RFKGGKGVAT LMGVSLALAW
PIGLVYAVTW LGVLFLSRIS SLGGMSAAVV APVAAAVLGY APYVPVLALL ALLVLYLHRE
NIARLRAGTE PKVGSRK