Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1774 |
Symbol | |
ID | 3918333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1871233 |
End bp | 1872684 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640444515 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_497048 |
Protein GI | 87199791 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.759672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGTTC GAATCGGAAC CATCGTCTTT GCGGGATCGG CCCTGTCTGC GCTGCTCGGG GCGGTCGCGA TGGGGCTCGC CATGTGGATT GCCCAGCGCG AAGGCTTTTC GCACTATCTC GCAACCCGCG ATGCCGAGCG GCTCGACCAG CTGGTTCGGC GGTTCGACGA GGAGGCTGTC GCGCGAGGCG GAATTGCTGC CTTCAGGGCG GGGCGCTTCA CGCTTGGCGA GGCTTTCGGC GCGCTCGGGC CTCCGCCGAT AACGGGCCAC GTGTCGCCTG AGGGCGACCG CTCACCGCCC AGAGGCCGTC CACCACCGTC GGAAGACATC GGCGGGCGCC TGGTGCTGTT CGATGCCTCG GGCGAGCGCC TTTCCGGCCC TGAGCGTCCG CCTGTGCTGC CAGGCATGGA CGGCAGGCCT CCGCCGCCGC GCATCGAGCA CCGCACGCTT ACGGTCGAAG GCGTGCAGGT CGGCACGATA GCGATGCTGC CCCGCGTTCC GGCAAACGGC GACGTCGAGG CCAGGTTCCT GCAAAGCCAG GTTCGCTATG GCCTGTTGGC CTTGCTCGTG GTCGTTCTGT TGTGCCTCTA TCCGTCATGG CTGGTAGGGC GAGCCGGTGC CCGCGCTGCC GGCCGGTTCG CACGCCGCAC CGCAGCCATC GCGGCGGGCG ACTATTATCG CTACGACCGC AAGCCCAGCT TCGTCGTGGA ACTTGACGCC GTGGGGCTGG ACTTGTCGCG CATGGCAGGC AGCCTGCAGC GGATGGAAAG CGCGCGCAGG CGCTGGCTTG CCGAGATCGC GCACGAATTG CGAACGCCAC TGGCGGTGCT GCGCGGGGAG ATCGAAGCCC TGCGCGACGG TATCCGGCAG CCCGGACGCG CCGAGATCGA TTCCCTCCTG GCCGAGGCCG GATCGCTCGG CAGACTGGTC GACGACCTGC ATTTCCTGTC GGTTTCCGAG CTGGAGGGCA TGGCTTGCCA CTTCGAGCAG GTCGATCCTG CCGAAATCTG CGGGCTGGCC CTGCGCCGGG CACAGATCCT GTCGAAGGCC GAGGGGCTGT CGTTCGCTCT TTCCGTTAGC GGCAATGGCG TTGGCACGGC TTGGTGGGAC CGCGACCGGA TCGACCAGTT GCTCGCCAAC CTGCTCGCCA ACGCGTGCCG CTACACCGAC CGCCCAGGCA AGATCGAGAT GCTGCTTCAC GCGGAGCACG ACGGGCTGCG GATCGTCATC GACGACACGC CGCCAGGCGT TGATCCCGCC CATTTGCCAC ACCTGTTCGA GCCCCTCTAT CGCGCGGACC CTTCGCGCTC GAGGGCGAGC GGAGGCAGCG GACTGGGGCT TTCGGTCTGC GCCACGATCG TTGAGGCGCA TGGCGGAGCG ATTGCCGCCG GGTCGTCTCC GTTGGGCGGG CTTCGCGTGA CAGTGGACCT TCCGCGCCGG AGCGCCGCAT GA
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Protein sequence | MRVRIGTIVF AGSALSALLG AVAMGLAMWI AQREGFSHYL ATRDAERLDQ LVRRFDEEAV ARGGIAAFRA GRFTLGEAFG ALGPPPITGH VSPEGDRSPP RGRPPPSEDI GGRLVLFDAS GERLSGPERP PVLPGMDGRP PPPRIEHRTL TVEGVQVGTI AMLPRVPANG DVEARFLQSQ VRYGLLALLV VVLLCLYPSW LVGRAGARAA GRFARRTAAI AAGDYYRYDR KPSFVVELDA VGLDLSRMAG SLQRMESARR RWLAEIAHEL RTPLAVLRGE IEALRDGIRQ PGRAEIDSLL AEAGSLGRLV DDLHFLSVSE LEGMACHFEQ VDPAEICGLA LRRAQILSKA EGLSFALSVS GNGVGTAWWD RDRIDQLLAN LLANACRYTD RPGKIEMLLH AEHDGLRIVI DDTPPGVDPA HLPHLFEPLY RADPSRSRAS GGSGLGLSVC ATIVEAHGGA IAAGSSPLGG LRVTVDLPRR SAA
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