Gene Saro_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1753 
Symbol 
ID3916328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1848137 
End bp1849324 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content69% 
IMG OID640444494 
ProductFmu (Sun) 
Protein accessionYP_497027 
Protein GI87199770 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.41639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCTT CCGCCCGCGT ACAGGCGGCG ATCGATCTGC TTGACGCGGT GATCGCGGCG 
GCGAAGGCGC AAGGGGCATC TGCCGATCGG ATCGCCGCGG ACTGGTTCCG GTCGCGGCGC
TTCGTCGGCT CGAAGGATCG CCGCGCGATC CGTGAACTCG TGTGGAGCGC GATCCGCGTC
TGCGGCGAAG TCCCGGAAAG CGGCCGCGCG GCGATGCTGC GCGTGGCCGT GGCTGACCCT
GGAATTGCCG CGCTTTTCGA TGGTTCCACA TATGGGCCTG CGCCGATCAG GGCAGGCGAA
GTGGCGGCCG AGGGCGGCAA CGCGCCCGCC TGGCTGAGCG AGCGCTTGCG GCAGTCCGGC
CTTGGCGAGG ACGAGCAGGC GGCGCTGTTG GGCAGGGCGC CGCTCGACAT CCGGGCAAAC
ACCCTAAGGA TCACGCGCGA CGAACTTCGG CTGCGGCTTC CCGTCGAGTT GGAAGTCACT
GCCGCGCCCG ATGCGCTGCG CCTGCCGTCC GGCACGGCCG CCGAAAGCTG GCCCGAGTTC
CAGGAAGGCC TGTTCGAAGT GCAGGATTCC GGCAGCCAGA TCGCTTGCAT GGCGCTGGAC
GTGAAGCCGG GCGAAGCCGT GGTCGATCTT TGCGCCGGGG GTGGCGGCAA GACGCTTTCG
CTCGGTGCGG CGATGGCCAA CACCGGCGAA CTGCTGGCGT GCGACATCGA CCGCGCGCGT
CTGTCGCGGC TACCGGACCG GGCCGCGCGT GCGGGCGTAC TTGCGCAGAC GCGGCTGCTC
AACCCCGGGA AAGAGGCCGA GATGCTTGCC GACTGGGCGG GCAGGGCCGA TGCCGTGATG
GTTGACGCAC CATGTTCGGG CACGGGCACC TGGCGGCGAA ATCCCGAAGC GCGCTGGCGG
CTCGATCCAA GGTCCATCGA ACGCTACTGC ACGATGCAGG CCAATGTTCT CGAGATCGGT
GCCGGGCTGG TGCGGCCCGG CGGACGCCTG ACCTATGTGG TCTGCTCGTT GATCGATGCG
GAGGGGCGCG ACCGGATCGA GGCGTTTCTT GCAGCGCATC CGGACTGGTC CGTCGCCATG
CCGCCGCTTC CGGCGGGCCG TCCGCATGGC AAGGGCTGGC GCCTTACGCC CCTTGGTGAT
GGTACCGACG GGTTTTTCTT CGCAACAATC GTGCGTCGTG TTAACTGA
 
Protein sequence
MTPSARVQAA IDLLDAVIAA AKAQGASADR IAADWFRSRR FVGSKDRRAI RELVWSAIRV 
CGEVPESGRA AMLRVAVADP GIAALFDGST YGPAPIRAGE VAAEGGNAPA WLSERLRQSG
LGEDEQAALL GRAPLDIRAN TLRITRDELR LRLPVELEVT AAPDALRLPS GTAAESWPEF
QEGLFEVQDS GSQIACMALD VKPGEAVVDL CAGGGGKTLS LGAAMANTGE LLACDIDRAR
LSRLPDRAAR AGVLAQTRLL NPGKEAEMLA DWAGRADAVM VDAPCSGTGT WRRNPEARWR
LDPRSIERYC TMQANVLEIG AGLVRPGGRL TYVVCSLIDA EGRDRIEAFL AAHPDWSVAM
PPLPAGRPHG KGWRLTPLGD GTDGFFFATI VRRVN