Gene Saro_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1749 
Symbol 
ID3916324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1843203 
End bp1844057 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content64% 
IMG OID640444490 
Productprotein of unknown function, zinc metallopeptidase putative 
Protein accessionYP_497023 
Protein GI87199766 
COG category[R] General function prediction only 
COG ID[COG2321] Predicted metalloprotease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.639669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTCG ACGATTTCGA CAATTCCATC AATGTCGAAG ACCAGCGCGG AGGGCGCTTT 
CCACTCGGCG GAGGGGGCAA GCTCGGCTGC GGCTCGATTG TCATCGCGCT GATCGCCGCG
CTCGTTTTCG GTGTGGACCC GGCGCAGATG CTCGGCTCCC TCCAGCAAGT CCAGACGAGC
GCGCCGGTGG AGCAGCAGGG CGGCACCTCC GCTTCCGAAA GCTGCACCGT CAACGAATTC
AGCCGCGAGA GCTGCAACGC CCTGTCCTCG CTCAACAAGA CCTGGGGACC GCTGTTCCAG
CAGGCCAACA TCCCGTTCAA CGCACCCAAG CTGGTGTTCT ATTCGCAGGC TGGCCAATCC
GGCTGCGGCG CGGCGCAGAG CGCGATGGGG CCGTTCTATT GCCCGAGCGA CGCGGGCATC
TACATCGACA CCGACTTCTA TACGGAAATG GACCGCCAGA TGGGCGCGGG CGGCGATTTC
GCGCGCGTCT ATGTGATGGC GCACGAATAT GGCCACCACA TCCAGAACCT GCTCGGCACC
TCGGACAAGG TCCGCCAGCT CCAGCAGCGC AGCCCCAGCC AGGCCAACCA GCTCTCCGTC
CGGCTCGAAC TCCAGGCAGA TTGCTACGCG GGCGTCTGGG CAGGCCGCAA CCGCGACAGG
ATCGAGGCGG GCGATATCGA GGAAGGCATG CGCGCCGCGC ACCAGATCGG TGACGACACA
CTGATGAAGG CGGCAGGCCG CCGCCCGGTA GAGGAAGCCT TCACCCATGG CAGTTCCGCC
CAGCGAATGC AGTGGCTGCG CAAGGGCCTC GAAACAGGCG ACGAGGATCA GTGCGATACG
TTCACTGATC TTTAA
 
Protein sequence
MRLDDFDNSI NVEDQRGGRF PLGGGGKLGC GSIVIALIAA LVFGVDPAQM LGSLQQVQTS 
APVEQQGGTS ASESCTVNEF SRESCNALSS LNKTWGPLFQ QANIPFNAPK LVFYSQAGQS
GCGAAQSAMG PFYCPSDAGI YIDTDFYTEM DRQMGAGGDF ARVYVMAHEY GHHIQNLLGT
SDKVRQLQQR SPSQANQLSV RLELQADCYA GVWAGRNRDR IEAGDIEEGM RAAHQIGDDT
LMKAAGRRPV EEAFTHGSSA QRMQWLRKGL ETGDEDQCDT FTDL