Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1746 |
Symbol | sdhA |
ID | 3916321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1839579 |
End bp | 1841393 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640444487 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_497020 |
Protein GI | 87199763 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.721199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCGA CTCAGCCTGC CTACAAGATC ATCGACCACA CCTACGACAC CGTCGTCGTG GGCGCGGGCG GTTCGGGCCT GCGCGCGACC ATGGGTTCGG CCCAGGCCGG CCTGCGCACC GCCTGCATCA CCAAGGTCTT CCCGACCCGT TCGCACACCG TGGCGGCACA GGGTGGCATC GCCGCCAGCC TCGGCAACAA TTCGCCGGAC CACTGGACCT GGCACATGTA CGACACCGTC AAGGGGTCTG ACTGGCTGGG CGACCAGGAT GCCATCGAAT ACATGGTGCG CGAGGCTCCG GCCGCGGTCT ACGAACTGGA ACACGCGGGT GTCCCGTTCA GCCGCAACCC CGAAGGCACG ATCTACCAGC GTCCGTTCGG CGGTCACATG CAGAACATGG GTGAAGGCCC GCCGGTTCAG CGCACCTGCG CCGCCGCCGA CCGTACCGGC CACGCCATGC TTCACGCGCT GTACCAGCAG AGCCTGAAGT ACGACGCCGA CTTCTTCATC GAATACTTCG CGATCGACCT GATCATGGAG AACGGTGAAT GCCGCGGCGT GATCGCGCTG TGCATGGACG ACGGCTCGAT CCACCGCTTC CGCAGCCATG CGGTCGTGCT GGCGACCGGC GGCTATGGCC GTTCGTACTT CACCGCGACG TCGGCCCATA CCTGCACCGG CGACGGCGGC GGCATGGTGC TGCGCGCGGG CCTGCCGCTG CAGGACATGG AATTCGTGCA GTTCCACCCG ACCGGCATCT ACGGCGCGGG CGTGCTCATC ACCGAAGGCG CGCGTGGTGA GGGCGGCTAC CTGACGAACT CCGAGGGCGA GCGTTTCATG GAGCGCTATG CCCCGTCGGC CAAGGACCTT GCGTCGCGCG ACGTCGTGTC GCGTTCGATG GCGATGGAAA TCCGCGAGGG TCGCGGCGTC GGTCCGCACA AGGACCACAT CTACCTGCAC CTCGACCACA TCGACCAGAA GGTGCTGGCA GAGCGTCTGC CCGGCATCAC CGAAAGCGGC AAGATCTTCG CGGGTGTCGA TCTTACCCGC CAGCCGCTGC CGGTCGTGCC GACCGTGCAC TACAACATGG GCGGCATCCC GACGAACTAT CACGGCGAAG TCGTCACCAT CGGCGCCGAC GGCAACCCCG AGACGATCGT CCCGGGTCTG TTCGCGGTAG GCGAAGCGGC CTGCGTTTCG GTCCACGGCG CGAACCGCCT TGGCTCGAAC TCGCTGATCG ACCTTGTCGT GTTCGGCCGT GCCACGGGCC TGCGCCTCAA GGAACTGATC AAGCCGGGCA CCGCGCACAA CTCGCTGCCC AAGGACAGCG CCGACCTCGC GCTGACCCGC CTCGATCACT TCCGCCATGC CAAGGGCGGT TCGCCCACCG CCGAAGTGCG CATCGAAATG CAGCGCACGA TGTCGGCCCA CGCGGCGGTG TTCCGCACCG ACGAACTGAT GGCGGAAGGC AAGGTCAAGC TGGCCGATAC CTACAAGCGC ATGGAAGACA TCCACGTGTC CGACCGTTCG CTGATCTGGA ACTCGGACCT TGTCGAAACG CTCGAACTGG ACAACCTGAT CAGCCAGGCG ACCGTGACGA TGCATTCCGC GCATAACCGC AAGGAAAGCC GCGGTGCCCA CGCGCACGAG GATTTCCCCG ATCGCAACGA CGCCGAGTGG ATGAAGCACA CCGCCACCTG GTTCAACGGA TGGGGCGGCA AGGGTGGCGA AGTCCGCATC GACTATCGCC CGGTCCACGA ATACACGCTG ACCGACGACG TCGAGTACAT CAAGCCGAAG AAGCGCGTGT ACTGA
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Protein sequence | MTSTQPAYKI IDHTYDTVVV GAGGSGLRAT MGSAQAGLRT ACITKVFPTR SHTVAAQGGI AASLGNNSPD HWTWHMYDTV KGSDWLGDQD AIEYMVREAP AAVYELEHAG VPFSRNPEGT IYQRPFGGHM QNMGEGPPVQ RTCAAADRTG HAMLHALYQQ SLKYDADFFI EYFAIDLIME NGECRGVIAL CMDDGSIHRF RSHAVVLATG GYGRSYFTAT SAHTCTGDGG GMVLRAGLPL QDMEFVQFHP TGIYGAGVLI TEGARGEGGY LTNSEGERFM ERYAPSAKDL ASRDVVSRSM AMEIREGRGV GPHKDHIYLH LDHIDQKVLA ERLPGITESG KIFAGVDLTR QPLPVVPTVH YNMGGIPTNY HGEVVTIGAD GNPETIVPGL FAVGEAACVS VHGANRLGSN SLIDLVVFGR ATGLRLKELI KPGTAHNSLP KDSADLALTR LDHFRHAKGG SPTAEVRIEM QRTMSAHAAV FRTDELMAEG KVKLADTYKR MEDIHVSDRS LIWNSDLVET LELDNLISQA TVTMHSAHNR KESRGAHAHE DFPDRNDAEW MKHTATWFNG WGGKGGEVRI DYRPVHEYTL TDDVEYIKPK KRVY
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