Gene Saro_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1744 
Symbol 
ID3916319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1838728 
End bp1839153 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID640444485 
Productsuccinate dehydrogenase subunit C 
Protein accessionYP_497018 
Protein GI87199761 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.807466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAGG CGCGCAAAGC ACGGCCGATT TCGCCGCATC TCCAGATCTG GCGCTGGGGC 
CCGGCCATGC TGGTCTCGAT CCTGCACCGC ATCACCGGCA ATGGCCTCGC CTTCGCGGGC 
CTTGGGCTTC TGCTGTGGTG GGTCGGTGCG CTGGCAAGCG GTCCGGAAAG CTACCAGACC 
TTCCTCGACT GGGTCTGGGT CGGCAGTGCC GGCGGCATCC AGGCCGTTAC CGCGATCCTC 
GGCAAGATCG TCCTCGTCGG CCTTAGCTGG GCCTTCTTCC AGCACGCCGC CTCGGGCATC 
CGCCACCTGA TCCTCGACAT CGGCGCCGGC TACGAACTGG ATGCCAATGC GCGCTGGTCG 
AGCCTGACGA TCGTCATCTC GGTCCTTCTC ACCATCGCAT TCTGGGCTTT CGTGCTGCTG 
CGCTGA
 
Protein sequence
MAQARKARPI SPHLQIWRWG PAMLVSILHR ITGNGLAFAG LGLLLWWVGA LASGPESYQT 
FLDWVWVGSA GGIQAVTAIL GKIVLVGLSW AFFQHAASGI RHLILDIGAG YELDANARWS 
SLTIVISVLL TIAFWAFVLL R