Gene Saro_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1739 
Symbol 
ID3916314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1834609 
End bp1835235 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content66% 
IMG OID640444480 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_497013 
Protein GI87199756 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0365796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCATTCC ATACCTGGTG GCTGTTCGTC GTCACCGTGT TCTTCATCTC GGGATCGCCC 
GGCCCCAACA TGCTGCACGT GATGACGCGC AGCGTGCAGT TCGGGCTGGG GCGCACGCTC 
TATGCGATGG CGGGGTGCTT CCTCGCCGTG CTCAGCCTGC TCACCGCGTC CGCGCTTGGC 
CTGTCGGCGC TGCTGATGGC GCTGCCGGGG GCCTTCATGG TCTTGCGCAT TGTCGGCGCT 
GCCTATCTGC TCTGGCTCGG CTACAAGGCA TGGACCAGCT CGGTCGCGGC GGTGGAGGCG 
GGTGCCGAGC GCAACGGCCA GGTGCTGACC AACCTGCAGA TCTTCCACAC CGCTTTCGGC 
GTCGGCATTT CCAATCCGAA GGCGCTGCTG TTCGCTGCTG CCTTCCTGCC GCAGTTCATC 
GATCCCGGCC GCCCCGAACT GCCCCAGTTC GCGATCATGG TGCTCACTTT CGGCGTCACC 
GAAATCTCGT GGTTCTTCAT CTATGCGCTG GGCGGGCTGT CGATCGCGCG GGCGCTCACC 
CGGCCCGGCC TGCAGCGGCT GTTCAACCGC GTGACCGGGG GCGTCTTTGC CGCTTTCGGG 
CTCGGCATGC TCGTCGCACA GCGCTGA
 
Protein sequence
MAFHTWWLFV VTVFFISGSP GPNMLHVMTR SVQFGLGRTL YAMAGCFLAV LSLLTASALG 
LSALLMALPG AFMVLRIVGA AYLLWLGYKA WTSSVAAVEA GAERNGQVLT NLQIFHTAFG 
VGISNPKALL FAAAFLPQFI DPGRPELPQF AIMVLTFGVT EISWFFIYAL GGLSIARALT 
RPGLQRLFNR VTGGVFAAFG LGMLVAQR