| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1738 |
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| Symbol | |
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| ID | 3916313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1832438 |
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| End bp | 1834603 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640444479 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_497012 |
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| Protein GI | 87199755 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00107521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAT CGGCCCTCAC CGAAGCCGAA GCCGCCAACG AGCTGATGCG CCTGGCAAGG
CAGATCGCGA AGCACAACCG CCTCTATCAT GCAGAGGATT CGCCCGAGAT CACCGATGCG
GAATACGATG CGCTTGTTCG CCGCAATGCT GAACTCGAAG CTGCCTTTCC GCACCTGATC
CGGCCCGACA GCCCGAGCGC GCAGATCGGG CACGAGATTG CCGCTTCGCC CCTGGGCAAG
GTGCAGCACG AGGTTCGCAT GATGAGCCTC GACAATGCCT TCACCGACGA GGAGGTCGAG
GAATTCGTCG CGCGCGTCCG CCGTTTCCTG GCGCTGCCCG AAGATGCCGA AGTGGTGATG
ACCGCCGAAG ACAAGATCGA CGGCTTGTCC TGCTCGCTGC GCTACGAGAA CGGCAGGCTG
GTCCGCGCCG CGACGCGCGG CGATGGACAG GTGGGCGAGG ACGTGACCGC CAACGTCGCC
CACATCCCGG ACATCCCGCA GGAGTTGAAA GCCGCCGGGC TGTTCGACAT CCCCGCCGTC
TTCGAGATTC GCGGCGAGGT CTACATGGCG AAGGACGATT TCCTCGCCCT CAATGCCCGC
CAGGCCGAAG CGGGCGAAAA GATCTTCGCC AACCCGCGCA ACGGCGCTGC GGGTTCGCTC
CGCCAGAAGG ACGCCAGCGT CACCGCAAGC CGTCCTTTGC GCTTCCTCGC CCATGGCTGG
GGCGCGGCGA GCGAAGTCCC CGCTGCCACC CAGTTCGAGA TGATGCGCAA GATTGCGGAC
TGGGGCGTAC CTGTCTCGCC GCTGCTCGTG CGCTGTTCGT CCGCCGCCGA AATGGTCGCG
CACTATCGCG ACATTGGCGA GAAGCGCGCT TCGCTGCCCT ATGACATCGA CGGCGTGGTC
TACAAGGTCG ACCGGCTCGA CTGGCAGGAC CGGCTCGGCT TCGTCGCGAA GGCCCCGCGC
TGGGGCATTG CCCACAAGTT CCCGGCGGAA CGTGCCGAAA CCACGCTCGA TGCCATCGAC
ATCCAGGTCG GCCGCACCGG AAAGCTGACG CCGGTCGGCC GCCTCAAGCC GGTACTGGTC
GGCGGGGTTA CCGTCACCAA CGTCACCTTG CACAATCGCG ATGAAATCGG CCGTCTGGGC
CTTCGCGTGG GCGACCGCAT CGTCCTCCAG CGGGCAGGCG ACGTGATCCC GCAGGTTGTC
GAGAACCTCA CCCGCGAAGA ACCCCGCGAC CCTTACCACT TTCCCGACCA TTGCCCCGAA
TGCGGGTCCG AAGCCGTTGC CGAGGAAGGC GAGGTCGACG TGCGCTGCAC CGGCGGCCTG
ATCTGCCCGG CCCAGCGCGT CGAACGCCTC AAGCACTTCG TCAGCCGCGC CGCGCTCGAC
ATCGAAGGGC TGGGCGAAAA GACAATCATC GAATTCTTCC AGCTGGGCTG GCTCGAAAGC
CCCGCCGATA TCTTCCGCCT CAGGAAGCGC CGCAGCGAGA TCGTCGGCCG TGAAGGCTGG
AAGGACAAGT CGGTCGACAA CCTTCTCGCC GCGATCGAGG CCAAGCGCCA GCCCGATGCC
GCCCGCCTGC TGTTCGGCCT TGGCATCCGG CATGTCGGTG CGGTCACCGC CCGGGACCTT
ATGAAACGCT TCGTCACGCT TCCCGCTCTG CGCGAAGCCG CCCGGCAAGC ATCGTCGGCG
GCACGGGAAG GGGAACCGGC GAACGCCGAT GGAGCGTACG ATCCGGCAAC AGTTACGCCC
GATTCCGACA CTGCCGGCGC GGAGGCGGGC CGATCCGATG CCTTGGCCGA CCTTCTGTCC
ATCGATGGCG TCGGCCCGGT CGTGGTCGAG GCGCTAGGCG ATTTCTTCCA CGAACCCCAC
AACATCGCCG TCTGGGAAGA TCTGCTTTCC GAAGTCTCGC CGCCGCCCTA TGTCGTCGAA
ACGAAGGACA GTGCCGTGGC CGGAAAGACC ATCGTGTTCA CCGGCAAGCT CGAAACCATG
AGCCGTGACG AAGCCAAGGC ACAGGCCGAG GCCTTGGGCG CGCGGACGGC GGGCTCGGTT
TCGGCCAAGA CCGATCTGGT CGTGGCGGGG CCGGGCGCAG GTTCCAAGCT GAAGCAGGCG
GCGGCGCTGG GCATCGATGT GATCGACGAG GCGGCATGGG CCGAAATCGT CAGGCAGGCG
GGGTAA
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| Protein sequence | MTTSALTEAE AANELMRLAR QIAKHNRLYH AEDSPEITDA EYDALVRRNA ELEAAFPHLI
RPDSPSAQIG HEIAASPLGK VQHEVRMMSL DNAFTDEEVE EFVARVRRFL ALPEDAEVVM
TAEDKIDGLS CSLRYENGRL VRAATRGDGQ VGEDVTANVA HIPDIPQELK AAGLFDIPAV
FEIRGEVYMA KDDFLALNAR QAEAGEKIFA NPRNGAAGSL RQKDASVTAS RPLRFLAHGW
GAASEVPAAT QFEMMRKIAD WGVPVSPLLV RCSSAAEMVA HYRDIGEKRA SLPYDIDGVV
YKVDRLDWQD RLGFVAKAPR WGIAHKFPAE RAETTLDAID IQVGRTGKLT PVGRLKPVLV
GGVTVTNVTL HNRDEIGRLG LRVGDRIVLQ RAGDVIPQVV ENLTREEPRD PYHFPDHCPE
CGSEAVAEEG EVDVRCTGGL ICPAQRVERL KHFVSRAALD IEGLGEKTII EFFQLGWLES
PADIFRLRKR RSEIVGREGW KDKSVDNLLA AIEAKRQPDA ARLLFGLGIR HVGAVTARDL
MKRFVTLPAL REAARQASSA AREGEPANAD GAYDPATVTP DSDTAGAEAG RSDALADLLS
IDGVGPVVVE ALGDFFHEPH NIAVWEDLLS EVSPPPYVVE TKDSAVAGKT IVFTGKLETM
SRDEAKAQAE ALGARTAGSV SAKTDLVVAG PGAGSKLKQA AALGIDVIDE AAWAEIVRQA
G
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