Gene Saro_1727 details

Gene Information

• Locus tag: Saro_1727
• ID: 3916302
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1816983
• End bp: 1820396
• Gene Length: 3414 bp
• Protein Length: 1137 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640444468
• Product: glycoside hydrolase family protein
• Protein accession: YP_497001
• Protein GI: 87199744

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0544172
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATCC GCAACGGCCT TTCGGTCGCA ACGCTACTTG CCAGCACCAC CGTGCTCACG 
CCCGCTGCAC TCGCGGATAC CGCACCTGCG GTGCAGGCCG CCCCGGCGGC ATCGACACTC 
GACCAGCAGT TCCAGGATCC GCCGATGGAA GCGCGCCCGC GCGTCTGGTG GCACTGGATG 
AACGGCAACA TCACCAAGGA CGGCATTGCC AAGGACCTTG CGTGGATGAA GCGCGTCGGC 
ATCGGCGGCC TCCAGAACTT CGACGCGGGG CTCGATACGC CGCAAGTGGT CGACAAGCGT 
CTCGTCTACA TGACGCCCGA GTGGAAGGAC GCCTTCCGCT TCGCCGCGAT CGAGGCGGAC 
CGGCTCGGCC TCGAGCTCGC CATCGCCGCA TCCCCAGGCT GGTCGGAAAC CGGCGGCCCG 
TGGGTCAAGG CCGAGGACGG CCTCAAGAAG GTCGTCTGGA GCGAGACCGT CCTGAAGGGC 
GGCAAGCGCT TTTCCGGCAA GCTGCCGCTC CCGCCGGCCG AGACCGGGCC TTTCCTCGAC 
ATGCCGGAAT CCGATCCGCT TGCCGCCATT GTTGGCGATC ATGGCTTCAA GGCGCCCGCA 
CTATACAGCG ACGTGGCGGT TCTGGCCGTT CCGGATCTGG GCAAGCCACT GCCGGTTCCC 
GCTTATTCGG CCGGCGGCAA ATCGCTCGAT GCGGCAGCGC TTTCTGATGG CAGTCTCAAG 
ACCGGCGTGA CGCTGGCGCG CGGTCCGGTC GATGCGCCCA CGACCATCGT CGCCGCCTAT 
GGCGCGCCCC AGACGGTCCG CTCGGCCACC GTCTCGATCC CGGGCGCCAA GGGCACGTTC 
TCCGGCCCAA CCGTACAGAT GCACCTCGAA GCCAGCGACG ACGGGCAGGC GTGGCGCAAG 
GTGGCCGATT TCCCGGTGAC TGCGGCGCCT TCCACGGTCG GCTTCCCGGC CGTCACCGCC 
CGCCAGTTCC GCCTCGTCCT TGCGCCACTG CCGTTCAACG GGTCGAACAT GGGCGATCCG 
ATGCCGGGCC TGGCTCCGGT CGGCGGCTTC GTCGAAATGA TGGCCGCTGC CGCCAAGGCC 
CCCTTCGACG TCAAGCAGTT CCGCCTTTCG TCCGATGTGA TGGTCGACCA GTTCGAGAGC 
AAGGCCGGCT TTGCTGTCGT GCCCGACTAC TACGCCCTCG GCACGCCGGA CGCCGCCGCG 
GCGGGCATCG ATCCGAAGCA GGTGATCGAC CTGACCGGGC GCATGAAGCC AGATGGCACG 
CTCGACTGGA CGGCGCCCAA GGGCAACTGG CGGATCATCC GTCTCGGCTC CAGCCTGCTC 
GGCACGACCA ACCATCCCGC GCCGCCCGAG GCAACCGGCC TCGAAGTCGA CAAGTTCGAC 
GGCGATGCGG TTCGCCGTTA CCTTGAACAC TATATCGGCA TGTACAAGGA CGCGGCCGGT 
TCGGAACTCG TCGGCAAGCG CGGCGTCCGC GCGATCCTGA CCGATTCGAT CGAGGTCGGC 
GCGGCCAACT GGACCCCGCG CATGGTCGAG CAATTCAAGC GCCTGCGCGG CTACGATCCC 
ACGCCCTGGC TGCCCACGCT TGCCGGCGTT CTTGTCGGTA CGCGGGCCCA GTCCGACGGG 
TTCCTGCGCG ACTATCGCCA GACCCTGGCC GATCTCATGG CTTCCGAACA CTATGGCACG 
GTTGCCAGGG TCGCGCACGA GAACGACCTC AAGGTCTATG GAGAGGCGCT GGAAGACAAT 
CGTCCGTCGC TTGGCGATGA CATCGCCATG CGCAGCCACG CCGACGTTCC GATGTCGGCG 
CTGTGGACCT TCTCCCGCAA GGCAGGGCCC AATCCCAGCT ACATTGCCGA CATGAAGGGT 
GCTGCCTCCA CCGCCCACAT CTACGGGCAG AACCTCGTCG CTGCGGAATC GATGACTTCC 
GCCCTCGCTC CCTGGGCCTA TGCGCCCAAC GAGTTGCGCC GCATCATCGA CCTCGAATTT 
GCCAGCGGCG TGAACCGCCC GGTCGTTCAC ACCTCGGTGC ACCAGCCCGT CGACGACAAG 
GTGCCCGGCA TGTCGCTGAT GATCTTCGGG CAGTACTTCA ACCGGCACGA AGCCTGGGCC 
GAACTGGCGC GGCCCTGGGT CGACTACATG GCCCGTTCGT CGCTGTTGCT TCAGGCCGGC 
AGGAACGTCG CGGACGTGGC GTACTTCTAT GGCGAGGAAG GGCCGCTCAC CGCGCTCTAC 
GGCCGCAAGC GCATCGAAGA TGCGCCGAAG GTGCACGCCT ATGACTTCAT CAACCGCGAC 
GCCCTGTTCG ATGCGGTCGA AGTGCAGGGA GGCGAAGTCG TCGCGAAGGG CGGCGCGCGC 
TACAAGGCGA TCCAGCTCGG CGGCTCGTCC CGGCGCATGA CCTTGCCGAC GTTGCGTCGC 
CTCGCGGCGC TGGTCGAAGC TGGCGCGACC GTTGTCGGCA GCCCGCCGGA AGGTTCACCC 
GCGCTCAACG ACAGCGCGGC CGACTTCTCG GCGCTCGTCG CCAAGCTGTG GAGCGGTCAG 
CTGGTGACGA GGGTCGGGGC AGGGCAGGTG ATTGCCTCTG CCGACATCGA CCGCGCGCTT 
GCCGATGCCG GCATTGCGCC GGACCTGGTG CTCGATGGGA CGTCGGAGGA CGGCGAGGTG 
CTGTTCGTCC ACCGCGCCCT GCCGGACGGC GACGCATGGT TCCTCAACAA CCGCAAGGCA 
GCTCCGGAAG TCGTCGAGGC CCGTTTCCGC GTAACCGGCA AGCAACCGGA ACTGTGGCAC 
GCCGATACCG GCGAGACCGA GGCCATCTCC TACCGGATCG AGAATGGCCA GACGGTCGTA 
CCGCTGACGC TCGATGCCGA GGATTCGGTC TTCGTCGTGT TCCGCAAGCC GGCCTCGGCC 
AATTCCATGG CGATCAAGAA GGGCGTTCCA GCGACCGTCG CGACGCTCGA TGGTGCGTGG 
AAGGTCGCCT TCCAGCCCGG TCGCGGCGCC CCTGCATCCA TCGCTCTGCC AAGGCTGGGT 
TCACTCAGCG ATCAGGCCGA TCCGGGCGTG AAGTACTTCT CGGGTCTTGC CACCTACACC 
AGCACTTTCA CGCTGCCGAA GGGCGTGAAG CCGGGCCAGC CGCTATGGCT GAACCTCGGC 
CAGGTCGGTG AAATCGCCGA GGTCAGCGTC AACGGCAAGC ATGCCGGATA CGCCTGGCAC 
AAGCCCTATC GCGTCAACAT CGGGGCATCG GCGCGCAAGG GCGTCAATAC GCTCGAAGTG 
AAGGTCGCCA ACCTTTGGGT CAATCGCCTG ATCGGCGATG CTCAGCCCAA TGCGTCCCGG 
ATCACCTGGA CGGCGCTCCC GACCTATGGC CCCGACGCGC CTTTGCGGCC CTCGGGCCTG 
ATCGGGCCGG TGACGCTTGA AGCTATTGGG GCGGGGGTGC CGTCGAAGCC CTGA 

 

Protein sequence

MNIRNGLSVA TLLASTTVLT PAALADTAPA VQAAPAASTL DQQFQDPPME ARPRVWWHWM 
NGNITKDGIA KDLAWMKRVG IGGLQNFDAG LDTPQVVDKR LVYMTPEWKD AFRFAAIEAD 
RLGLELAIAA SPGWSETGGP WVKAEDGLKK VVWSETVLKG GKRFSGKLPL PPAETGPFLD 
MPESDPLAAI VGDHGFKAPA LYSDVAVLAV PDLGKPLPVP AYSAGGKSLD AAALSDGSLK 
TGVTLARGPV DAPTTIVAAY GAPQTVRSAT VSIPGAKGTF SGPTVQMHLE ASDDGQAWRK 
VADFPVTAAP STVGFPAVTA RQFRLVLAPL PFNGSNMGDP MPGLAPVGGF VEMMAAAAKA 
PFDVKQFRLS SDVMVDQFES KAGFAVVPDY YALGTPDAAA AGIDPKQVID LTGRMKPDGT 
LDWTAPKGNW RIIRLGSSLL GTTNHPAPPE ATGLEVDKFD GDAVRRYLEH YIGMYKDAAG 
SELVGKRGVR AILTDSIEVG AANWTPRMVE QFKRLRGYDP TPWLPTLAGV LVGTRAQSDG 
FLRDYRQTLA DLMASEHYGT VARVAHENDL KVYGEALEDN RPSLGDDIAM RSHADVPMSA 
LWTFSRKAGP NPSYIADMKG AASTAHIYGQ NLVAAESMTS ALAPWAYAPN ELRRIIDLEF 
ASGVNRPVVH TSVHQPVDDK VPGMSLMIFG QYFNRHEAWA ELARPWVDYM ARSSLLLQAG 
RNVADVAYFY GEEGPLTALY GRKRIEDAPK VHAYDFINRD ALFDAVEVQG GEVVAKGGAR 
YKAIQLGGSS RRMTLPTLRR LAALVEAGAT VVGSPPEGSP ALNDSAADFS ALVAKLWSGQ 
LVTRVGAGQV IASADIDRAL ADAGIAPDLV LDGTSEDGEV LFVHRALPDG DAWFLNNRKA 
APEVVEARFR VTGKQPELWH ADTGETEAIS YRIENGQTVV PLTLDAEDSV FVVFRKPASA 
NSMAIKKGVP ATVATLDGAW KVAFQPGRGA PASIALPRLG SLSDQADPGV KYFSGLATYT 
STFTLPKGVK PGQPLWLNLG QVGEIAEVSV NGKHAGYAWH KPYRVNIGAS ARKGVNTLEV 
KVANLWVNRL IGDAQPNASR ITWTALPTYG PDAPLRPSGL IGPVTLEAIG AGVPSKP