| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1726 |
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| Symbol | |
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| ID | 3916301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1815647 |
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| End bp | 1816936 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640444467 |
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| Product | xylose isomerase-like TIM barrel |
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| Protein accession | YP_497000 |
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| Protein GI | 87199743 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4952] Predicted sugar isomerase |
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| TIGRFAM ID | [TIGR02629] L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.302713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTCTCC CGATTTCCGC AGATCTCATC GCCGAACGCA ACGCCCGCCA CGTCGAGGCG
CTCGAGGAAG ATTATGCCGC GCTCGGTCGC AAGCTTGCAC GCACCGGCAT CGATATCGAT
GCGATCAAGG ATCGCGTGGC GGGCTTCTCG GTCGCCGTTC CGTCGTGGGG CGCGGGACGC
GGTGGCACGC GCTTCGCCAA GTTCCCGATC CCGGGCGAGC CGACCAACAT CCATGAGAAG
CTCGAGGACT GCGCGGTCAT CCAGCAGCTC TCGCGCGTCA CGCCCCGCGT CTCGCCGCAT
TTCCCGTGGG ACAAGGTGAG CGACTACAAG GCCCTGCGCG AGGAAGCGGC AAGCCTCGGC
CTTGGCTGGG ATGCGGTCAA CTCGAACACC TTCCAGGACC AGGTCGGGCA GGCCCATACT
TACGCCAATG GCTCGCTCTC GGCGCAGGAT GCCGCGACGC GCCGTCAGGC GGTCGAACAC
AACATCGAAT GCATCGAGAT CGGCGTTCAG CTCGGCTCGA CCGACCTGAC TGTGTGGGTC
GGCGACGGCA CCAACTTCCC CGGCCAGCAG GACCTTGGCC GCAGCCTCGA CCGCTATCTC
GATGGCGCTG CGCAGATCTA TGCCGCGCTG CCCGACGACT GGCGGATGCT GCTCGAACAC
AAGATGTTCG AGCCGGCCTT CTACTCGACT GTCATCAGCG ACTGGGGCTC GTCCATCCTC
GCCGCGCAGG AACTCGGCCC CAAGGCCAAG TGTCTCGTCG ATCTCGGCCA CCATGCGCCC
AACGTGAACA TCGAGCAGAT CGTCGCGCGC CTGCACCGCT TCGGAAAGCT CGGTGGCTTC
CACTTCAACG ACAGCAAGTA CGGAGACGAC GACCTCGATT CCGGCTCGAT CAATCCGCAC
CAGTTGTTCC TCGTATTCAA CGAACTGGTC GAGGCTGAGC TCAACCCGCG GGATGGCTTC
AACCCCAGCT ACATGATCGA CCAGTCGCAC AACGTGACCG ACCCGATCGA ATCCATGCTG
TCTTCTGCCG AGACGATCAC GCAGTGCTTC GCGAAGGCCC AGCTTGTGGA TCGCGAGGCG
CTTCACGCCG CGCAGGAAAC CAACGACACG ATGATGGCGT TCCAGGCCCT GCGGCGGGCC
TACAACGTCG ATGTCGCGCC GATCCTTGCC AAGGCGCGCA TGGAAGCGGG CGGCGCGATC
GACGTGCTCG AAGCCTACCG CACCAGCCAG TATCGCGGCC GGAAGGCGCA GGAACGCAAG
GCTGTCGGCC TCGGCGCCGG CATCGTCTGA
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| Protein sequence | MTLPISADLI AERNARHVEA LEEDYAALGR KLARTGIDID AIKDRVAGFS VAVPSWGAGR
GGTRFAKFPI PGEPTNIHEK LEDCAVIQQL SRVTPRVSPH FPWDKVSDYK ALREEAASLG
LGWDAVNSNT FQDQVGQAHT YANGSLSAQD AATRRQAVEH NIECIEIGVQ LGSTDLTVWV
GDGTNFPGQQ DLGRSLDRYL DGAAQIYAAL PDDWRMLLEH KMFEPAFYST VISDWGSSIL
AAQELGPKAK CLVDLGHHAP NVNIEQIVAR LHRFGKLGGF HFNDSKYGDD DLDSGSINPH
QLFLVFNELV EAELNPRDGF NPSYMIDQSH NVTDPIESML SSAETITQCF AKAQLVDREA
LHAAQETNDT MMAFQALRRA YNVDVAPILA KARMEAGGAI DVLEAYRTSQ YRGRKAQERK
AVGLGAGIV
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