| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1713 |
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| Symbol | |
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| ID | 3916288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1800022 |
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| End bp | 1801488 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640444454 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_496987 |
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| Protein GI | 87199730 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.13912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCCC TCCTCCCCCA TCGCCGCCCG CTCCGCAGCA TGGCCGGCGC CTTGGTCGTG
GCCGCGCTTC TCGCCGGCTG CACCACGGTG GGCCCGAACT ACGCCGGAGC CCCCGACGCC
GCACCCCAGG CCGTTTCCCG TGGCACGTTT GCCCGGGCAG GCGCCGATGC CCTCGCCGCC
GCGCCCGCGG CCCGGTGGTG GGAAAGCCTT GGCGATCCGG TTCTGAACCA GCTCGTCGAA
CAGGCGCTTG CCGACGCGCC CGGCATCGCC GCCGCAAACG CCCGCGTCGC CCAGTCGCGT
GCGGCGCTTG CGGCCAATCG CACCGCCGTG CTGCCTCAGC TCAACACGTC GTTCGCCGCG
CCCTACATCA ACGTCCCGGG CGGCCTGCTG AGCCCCAATG GCGAAAGCGG CGGGCGCGAC
GAGATCAACG CCTACAACCT CGGCTTCGAC GCCGCCTGGG AGATCGACCT GTTCGGCGGC
ACCCGCCGCA AGATCGAGGC CGCCTCGGCC CGCGCCGAAG CCGCCGAGGC GAGCGCTGCA
GACGCGCGCG TCACGCTTTC GGCAGAGATC GCGCGCGCCT ATGTCGGGCT GCGCGCCAGA
CAGGCCATGG TGGGCTTGCA GGAGCGGCAG GTGGAAATCG ACCGCGAGCT GGCCTCCCTC
GCCCGCCAGC GCTTCGAGGC CGGTCGCATC CCGCAGCAGC CGGTCAACGG CGCCGAGGCG
CAGGCCTTTT CCAGCGAAGC CGACCTTGCG AAGAGCCGCG CCGAAATCGC GGTCCTGATG
GACCAGATCG CGGTCCTCAC CGGCAAGGAG CCCGGCACGC TCGACGCGCT GCTCGTCGCG
CCCGCGCCAG TCCCGCTGCC CCCAGCGCAG GTCGCGGTCG GCGACCCCGC GCTGCTCCTG
CGCAGCCGCC CCGACATCCG CGCCGCCGAG CGCCAGCTTG CCGCCGCCAA TGCCGACGTC
GGCTCGCGAA TCGCGGACAA GTTCCCCAAG ATCTCGTTCC TTGGCCTGCT TGGCCTTGGC
GGGCAGGATT TCGGCGACGT GTTCGATCCG GGCAACATCG TCGGCATCGC CCTGCCGCAA
ATAAAGTGGT CGCTGTTCGA CGGTGGCCGC GCCGAACGTC AGGTCGAGGC CGCGCGCGGC
GCCTTTGCCG AGGCCGAGGC GAACTATCGC CGCACGGTCC TTTCAGCACT CCAGGACGCG
GAAGGATCGC TCGCCCGCTT TGGCGCGCAG CGGGTGGCCT TCGGCAAGGC GCTCGACGCG
GAGACCCGCG CGCGCCGTAA CGTCGAACTG CAACAGCAAC GACTGGCAGC AGGCACGATC
GGCAAGCCGG ACAGGCTGGA TGCGGAGCGC CAGGCCCTGC AACTGGCGAT GGCCGCCACC
TCTGCCCGGG CCGAACTGAC GACCGGTTTC GTCGCTGTCG AAAAGGCGCT CGGCCTCGGC
TGGACAGCCC CGGAGCCCGC GAAATGA
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| Protein sequence | MTALLPHRRP LRSMAGALVV AALLAGCTTV GPNYAGAPDA APQAVSRGTF ARAGADALAA
APAARWWESL GDPVLNQLVE QALADAPGIA AANARVAQSR AALAANRTAV LPQLNTSFAA
PYINVPGGLL SPNGESGGRD EINAYNLGFD AAWEIDLFGG TRRKIEAASA RAEAAEASAA
DARVTLSAEI ARAYVGLRAR QAMVGLQERQ VEIDRELASL ARQRFEAGRI PQQPVNGAEA
QAFSSEADLA KSRAEIAVLM DQIAVLTGKE PGTLDALLVA PAPVPLPPAQ VAVGDPALLL
RSRPDIRAAE RQLAAANADV GSRIADKFPK ISFLGLLGLG GQDFGDVFDP GNIVGIALPQ
IKWSLFDGGR AERQVEAARG AFAEAEANYR RTVLSALQDA EGSLARFGAQ RVAFGKALDA
ETRARRNVEL QQQRLAAGTI GKPDRLDAER QALQLAMAAT SARAELTTGF VAVEKALGLG
WTAPEPAK
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