Gene Saro_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1711 
Symbol 
ID3916286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1797851 
End bp1799113 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content67% 
IMG OID640444452 
ProductYceI 
Protein accessionYP_496985 
Protein GI87199728 
COG category[C] Energy production and conversion
[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein
[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.811721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGA TAAGTCCGGC GCGCTATTCG GCGGCGGCAA TCACGCTTCA CTGGATGATT 
GCGTTCCTGC TGCTGTTCCA GATCGGACTG GGCTGGGCGC TGGAGGACCT GCCGGAGGGC
GTGGCGCAGT TTGCCGGATA CCAGTTCCAC AAGTCGGTCG GGATCGCGAT CCTCATCCTC
AGCCTGGGTC GGCTCGCGGT GCGGCTGGTG AAGCCACGGC CGGCGCCGGT TCCAGCGGGA
AGGGCGCAGG CCTTTCTCGC GGCGGCGGTC CACGCGTTGC TCTATGGCGT GATGATCGTC
GGGCCGCTTA CGGGTTGGAT CATCGTTTCG ACCGCCAAGG TGCGATTGCA GACCATGCTG
TTCGGCACCG TCCCGTGGCC CGACCTGCCG GTAGGACAAG CGCTGCATGA ACCAGCCGAG
GTACTTCACG GCTTGCTCGG CACGGTCGGC GTTGCGCTGA TCGTGCTGCA TGTCGTCGGC
GCGATCTATC ACCATGTGAA GCGCGAGGAC GTGATAGGGC GGATGCTTCC GCGCTCCATC
GCGAGCCACA AGGCGATCGG CGTCGCGGCG GGCGTGGCGA TTGTCGCGGG TCTGCTGGCG
CTTTTCGGTG GACGGACGAT GTCCTTCGCC GTGCCGACGG CGGCGCCTTC GGTCGAGGCC
TCGTCAGCGC CCGTCGAGGC CGCGTCGCAG GGGGCAGTAG AGGAGATGCC CGAGGCCGCG
CCCTCGGAGG TTTCGTCGGA GGCTGCCAGC GCTGTGGCCA AGGCTGCGCC GTGGAAGCTG
GAGAAGGGCG GCCGACTGGG CTTTTCCGCC GAATACAGCG GAGAGGCGAT CCGGGGCACG
TTCAAGCGCT GGGAGGCAGA TATCGTGTTC GATCCGGAGG ACCTTGCCGG CTCCTCGATT
CGGGTGAACA TCGATCTCGC CTCCGTCGAA AGCGGCGATG CCCAGCGCGA CGACATGCTG
AAGAGCGACA GCTTCTTCGG CGTTGGCGCC GATCCACAGG CCAGGTTCGT TGCAACCTCG
ATCCGCAAGC GGGGCGAGGG GCGCTATGTC GCGAACGGGA CACTGACCCT GCACGGCAAG
GCGCGGCCGC TTGCCGTGGC GTTTACGCTG AAGATAGCGG GCGACCGGGC GACGGCCAGC
GGCAGCGCAA CCTTGCAGCG CCTGGCATTC GGCGTCGGCG AGGCCGAGTG GTCTGCGACG
GACCAGTTAA AGGACGCGGT CGGCGTCGAC TTCTCGTTGG CGGCGCGGCG GATCAGCCCT
TGA
 
Protein sequence
MTTISPARYS AAAITLHWMI AFLLLFQIGL GWALEDLPEG VAQFAGYQFH KSVGIAILIL 
SLGRLAVRLV KPRPAPVPAG RAQAFLAAAV HALLYGVMIV GPLTGWIIVS TAKVRLQTML
FGTVPWPDLP VGQALHEPAE VLHGLLGTVG VALIVLHVVG AIYHHVKRED VIGRMLPRSI
ASHKAIGVAA GVAIVAGLLA LFGGRTMSFA VPTAAPSVEA SSAPVEAASQ GAVEEMPEAA
PSEVSSEAAS AVAKAAPWKL EKGGRLGFSA EYSGEAIRGT FKRWEADIVF DPEDLAGSSI
RVNIDLASVE SGDAQRDDML KSDSFFGVGA DPQARFVATS IRKRGEGRYV ANGTLTLHGK
ARPLAVAFTL KIAGDRATAS GSATLQRLAF GVGEAEWSAT DQLKDAVGVD FSLAARRISP