Gene Saro_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1710 
Symbol 
ID3916285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1797170 
End bp1797823 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID640444451 
ProductTetR family transcriptional regulator 
Protein accessionYP_496984 
Protein GI87199727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.160964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTCG TCATGGCGAC GCTGACCGAA ACCCTGACCA CGCCCGACCG GCTTCTGGCG 
GGCGCCGAGA GGCTGGTGGT GCGAGAAGGC GTGCGCGCGC TGACGGTGCG GCGGATCGCG 
GAGGAGGCCG GGGTCAATTC GGCGCTGGTG CGCTATCATT TCGGCGATAC CGGCGGGTTG 
CTGGGCGAAC TTGCGCTTCG CAACGCCGCG CAGATGGCGA ACGAGCGAAC GGCGCTTCTG 
GACAGGCTCG TGCCCGGAGA TTTCATGGGC GCGGTCGATG CGCTGGTGGT GCCGCTGTGG 
GCGCGCGCGG CGATGAGCAG GCAGTTTCGT GCGATCGTGG TGCTGGACGA AATGTTTGCA 
CGGTCCGGCA GCGATCTCAA CGCCAGGATA TGGAGCGTCT TTGCCGACGG GGTGACGCGG 
GTGCAGGCGG CATTGGAAGC CTGCCTGCCG GGCGTGGACC CGCTTGCGCT GGCATGGCGC 
ATACGATTCG TGACGGCAGC GGCGCTCGAC ATCCCGCCGC GCGGATTGCC AGACGGTCGC 
GTGGGAGCCC GGGCGGCCTA TGGTGCCGAC AGCGAGGAGG AAAGGCTGGC CCATTTCCGC 
CTCTTTGCCG CGGACTCGCT GCGGATGGAC AAACGGGACG GTTACAGTTC ATAG
 
Protein sequence
MTFVMATLTE TLTTPDRLLA GAERLVVREG VRALTVRRIA EEAGVNSALV RYHFGDTGGL 
LGELALRNAA QMANERTALL DRLVPGDFMG AVDALVVPLW ARAAMSRQFR AIVVLDEMFA 
RSGSDLNARI WSVFADGVTR VQAALEACLP GVDPLALAWR IRFVTAAALD IPPRGLPDGR 
VGARAAYGAD SEEERLAHFR LFAADSLRMD KRDGYSS