| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1708 |
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| Symbol | |
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| ID | 3916283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1793755 |
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| End bp | 1796181 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640444449 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_496982 |
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| Protein GI | 87199725 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.164622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCC GCGTCCTTCT CGCGGGCGGC GCCGCTCCGC TCGCCCTCAT CGCGCCTGGC
GCCTTCGCCG CCGAAGCGCC TGTTGAAGCC GTCCCCACCG CTACCGCGCC TGTAGATGCC
CCTGCCGATG CGCAGGTCTC GTCGGCCGGC ACCGGAGCCA ATGACAGCGG CGATATCGTC
GTCACCGCTC GCCGCCGCGC CGAAACCGCG CAGGACGTGC CGCTGGCCAT CTCGGTCGTG
GGTGGCGAGC ATATCGACAG CACCGGCAGT TTCAACGTCG GCCGCCTCCA GCAGTTGACC
CCGACGTTGC AGTTCTATTC GTCGAACCCG CGCAACACCG CCGTGAACAT CCGCGGCCTT
GGCGTGCCGT TCGGCCTGAC CAACGACGGG ATCGAGCAGG GCGTCGGCAT CTATGTGGAC
GACGTCTACA ACTCGCGCGT GGCATCGGCG ACGTTCGACT TCCTCGACGT GAAGCAGATC
GAAGTCCTGC GCGGGCCGCA GGGCACGCTC TACGGCAAGA ACACTACCGC CGGCGCGATC
AACATCACCA CCAACCAGCC GACCTTCGAC TTCGAAGGCA AGGCCGAGGT GAGCGTGGGG
AACCTCAACT TCGTGCAGGC CAAGGGCGCG ATTTCCGGGC CGATCACCGA TACGCTGGCC
GCGCGCTTCG CGGTTTCGTC GACCAGCCGG CGCGGCACGA TCTACAACGT GACCACCAAC
CAGTGGATCC AGAGCCAGGA TAACCTGGGC CTGCGCGGCC AGCTCCTGTT CAAGCCAAGC
GAGGCCTTCA GCATCACGCT TGCCGGCGAC TACAGCGAGC AGGATGCGGT GTGCTGCGGT
TCGGTCTACG TCCGCACCGG CACCACCCAG CGCGCGACGA ACCGCCAGTT TGCCGCGCTC
GCGGCGGCGC AGGGCTATAC CGTGCCCAGC ACCAATCCCT TCGACCGCCT GACCGACCTC
GATTCCGCGC TCCAGGCGGG CAACAAGATC GGCGGCGTTT CGCTGAAGGT GAAGTGGGAC
GTGGGACCGG GTACGCTGAC TTCGGTCACC GCCTGGCGCT TCTGGGACTG GAAGCCGCAG
AACGACCGTG ACTTCACCGG CCTGCCTATC GTGGCGAAGT CGCAGAACCC GTCGCAGCAG
GACCAGTACA CGCAGGAACT GCGCTACAAC TATAGCGGCG ACAGCCTCGA CTTCGTGCTC
GGCGCGTTCG GCTTCTACCA GCGCATCGAC ACCCAGGGCA CCGAAGCTCA CGGCAGTGCT
TCGACCAAGT GGAACGTGAA CCCGTCCAGT TCGCTCTACA ACACGCAGGT CCTCGACGGG
CTGACCGCGC TCAACACGCA GTACCTCAAG AACACGAGCC TTGCCGTGTT CGGGCAGGCA
AGCTGGAAGG TGACCCCGGA ACTGACGCTG CAACCGGGCA TCCGCGTGAA CTACGACAAG
AAGGACGGCT TCTACCAGCG CCGGGTGTTC ACTGGCGCCG GCACCGAGAT CCTTCTCGAC
GGTACAACCA GCGCCACCAA GACCGCGCAG CTGGCGATCT TCACGCCGCA GACGATCTCG
CCCAGCTTCA GCGACTGGAA CTTCAGCTAC GACTTTACCG CGAGCTACAA GGTGGCGAGA
GGCGTGCTGG TCTATGCAAC TTACGCCAAG ACCTTCAAGT CGGGCGGCAT CAACCAGAAC
GGCGTGCCGG TGGATGCGTC GAACAACCCG ATCCTGGCGG CGGCGACGGT GAAGCCGGAA
TCGGTCCAGC ATTACGAGGC GGGCATCAAG ACCGAGTTCT GGGATCGCCG CGCGATCTTC
AACCTTTCGG CCTTCCGCAC CGACATCAAG GACTACCAGG CCAACGTCAA CAACGGACAG
TTCGGTGTGC TGCGCGGTTA CCTGGCGAAT GCCGGGGCGG TTCGTTCGCA GGGTATCGAG
GCCGACTTCT CGGTCCGTCC GAGCGAACGG TTCAACGCCT ACGTGAACAG CGCCTACACC
GACGCGACCT ATCGCAAGTT CGTCGATGCC CCGTGCCCGC CAGAGCTTTC CGGCGGCACC
AGCAGCCCGG CCAACTGCGA CATTTCGGGC CAGCGCCTGC CGGGCGTTTC GAAGTGGTCG
TTCTCTTTCG GGTTCGAGGC CAATGCGCCG GTCGAGTTCC TGAAGCAGGA CGGGCAGGTC
TACTTGGGGT ACGACGGAAG CTATCGGTCG GACTTCTCGT CCAACCCGAC GCCTTCGGCC
TATACCTGGA TCGATGGCTA TTCGCTGTCG AACTTCCGGC TGGGCTTCCG GACCGACGCG
GGCCTGGACG TCTATGGCTG GGTTCGCAAC GCCTTCGACC AGGACTACTT CGAGCAGCTC
TTCGTCGGCC CGGGCAATAC CGGCCTGATC GCGGGCCTGC CGGGCGATCC GAGGACCTGG
GGCTTCACCG TCCGCACGAA CTTCTGA
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| Protein sequence | MNFRVLLAGG AAPLALIAPG AFAAEAPVEA VPTATAPVDA PADAQVSSAG TGANDSGDIV
VTARRRAETA QDVPLAISVV GGEHIDSTGS FNVGRLQQLT PTLQFYSSNP RNTAVNIRGL
GVPFGLTNDG IEQGVGIYVD DVYNSRVASA TFDFLDVKQI EVLRGPQGTL YGKNTTAGAI
NITTNQPTFD FEGKAEVSVG NLNFVQAKGA ISGPITDTLA ARFAVSSTSR RGTIYNVTTN
QWIQSQDNLG LRGQLLFKPS EAFSITLAGD YSEQDAVCCG SVYVRTGTTQ RATNRQFAAL
AAAQGYTVPS TNPFDRLTDL DSALQAGNKI GGVSLKVKWD VGPGTLTSVT AWRFWDWKPQ
NDRDFTGLPI VAKSQNPSQQ DQYTQELRYN YSGDSLDFVL GAFGFYQRID TQGTEAHGSA
STKWNVNPSS SLYNTQVLDG LTALNTQYLK NTSLAVFGQA SWKVTPELTL QPGIRVNYDK
KDGFYQRRVF TGAGTEILLD GTTSATKTAQ LAIFTPQTIS PSFSDWNFSY DFTASYKVAR
GVLVYATYAK TFKSGGINQN GVPVDASNNP ILAAATVKPE SVQHYEAGIK TEFWDRRAIF
NLSAFRTDIK DYQANVNNGQ FGVLRGYLAN AGAVRSQGIE ADFSVRPSER FNAYVNSAYT
DATYRKFVDA PCPPELSGGT SSPANCDISG QRLPGVSKWS FSFGFEANAP VEFLKQDGQV
YLGYDGSYRS DFSSNPTPSA YTWIDGYSLS NFRLGFRTDA GLDVYGWVRN AFDQDYFEQL
FVGPGNTGLI AGLPGDPRTW GFTVRTNF
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