| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1676 |
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| Symbol | |
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| ID | 3916251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1758826 |
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| End bp | 1761453 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640444417 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_496950 |
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| Protein GI | 87199693 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.233734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATGA AGTCCGGACC AAGTTATACC GCACGTATTT CACGCCTGCT GCTGCTTGCA
GGCACGGCCA TCAGCTTCCC CGCGATGGCG CAGCAAGCGC AAAGCGATGC TGCGGAATCC
GATCCCAACA TCATCATCGT CACCGCGCAG AAGCGCAGCG AAAATCTCCA GAACGTGCCG
ATCTCGATCC AGGCGCTCGG CACGCAGAAG CTCGAGCAGC TCGGCGTCGC GAACTTCACG
GATTACGCGC AGCAATTGCC GTCGGTGACC TTCCAGGCGC TGGGCGGAAC GCCGGGTACC
AACGTCGTCT ACATGCGCGG CGTGGCTTCG GGCGGCGACG GCAACCACTC TGGCTCGCTG
CCTTCGGTCG GCGTCTATCT CGACGAGCAG CCGGTGACGA CCATCGGCGG CAACCTCGAT
GTCCACGTCT ACGACATCGC GCGCATCGAA AGCCTGTCCG GCCCGCAAGG CACCCTCTAC
GGTGCTTCCT CGGAAGCGGG CACGATCCGC ATCATCACCA ACAAGCCCGA CACGACCGGC
TTCTACGGCA GCGTCGATGC CGAGGTGAAC ACGGTCAACA AGGGCGGCGA AGGCTACAAG
TTCGAGGGCA TGATCAACGC CCCGATCTCG GCCATGGCGG CTCTTCGCGT CGTCGGTTAT
TACCAGCGCG ACGCGGGCTT CATCGACAAC GTGCCGGGCA CGCGGACCTT CCTGGGCACG
CCCGTGCTCG ACGAGAACGA CCAGTACGCG GGCAATCTGC CCGACGGGAT CAGCGTCAAC
AACAACGCCT TCGTGAAGAA GGACTACAAC TACACCGACA CCTACGGCGG CCGCGCCGCG
CTCAAGGTCG ATCTCGACGA CAACTGGACC GTGACCCCGC AGGTCATGTA CCAGAAGACC
AAGAGCCGCG GTTCATACGG CTTCGATCCA TCGGTCGGCG ACCTTCAGGT CCAGCACTTC
TTCCCCGAGT TCCGCAACGA CAAGTTCGTC CAGGCGGCGC TGACCATCGA GGGCAAGATC
GGCAACTGGG ACCTGACCTA TTCGGGCGCC TATCTCGATC GCCGCACGTT CCAGTCGTCG
GACTATACCG ACTACGCCGA AGCCTATGAC GCGCTCTATG CGAACTACAC CTACGAAGGC
ACGTTCTATT GCAGCGGGCT TGCCGGGTGT TTCGCCTACC AGGACGCCAA CGGCAACACG
ATCGACCCGC GCCAGAAGGT GATCGGCACC GACCACTTCA AGAAGCTGAG CCAGGAACTG
CGCATCGCAT CGCCGGCGGA CCAGCCGCTG CGGGTGGTTG CGGGCCTGTT CTACCAGCGC
CAGTCGAACG ACATTCACCA GGATTACCAG ATCGCCAATC TGGCACCAAA CCTGTCCGTC
AATGGCCATC CTGGTACGCT GTGGTTGACC GAGCAGAAGC GCGTCGACAA GGACTATGCC
GCGTTCGGTG AAGTGAGCTT CGACGTTGCG CCAACGGTCA CGCTGACGGC CGGCGGTCGC
TACTTCAAGT ACGACAACTC GCTGATCGGC TTCTTCGGCT TCGGCCGCAA TCCGGGCGAC
ACCGGCCAGT ACGATGGCGA CCCGCCGAAC GCGGCCTATT CAAACCGTAC CGGCGTTGCC
CAGTGCTTCA CCACTGCGGG CGAGCGGCTG TATGACCGCA GCACCGACAC CTACAGCTCG
TCGCGTACGC TGCTGCCGGC GGCGGTTCCG GGCGGGCCGT GCACCAACCT TGCGGTCTAT
CAGGACGGTA CGCTCAAACC GGTGCGCACC AAGGACGATG GCTTTACCTA TCGCTTCAAC
GCGACCTGGA AGCCGAACAG CGACGTGATG CTCTATGCCA CCTGGAGCCG CGGCTTCCGC
CCCGGCGGCA TCAACCGTCG CGCCGACGTC GAGCCCTACA AGGCGGACTT CCTCACCAAC
TACGAAGTCG GCTTCAAGTC GACGCTTGCG GGCGGAATGG TGCGCCTCAA CGGTGCGGTG
TACCAGCAGA ACTGGAAGGA CTTCCAGTTC GCGTTCCTTG GCGCCAACAG CTTTACCGAG
ATCCACAACG GCCCGAATGC CCGCATTCGC GGCGTCGACA TGGACGCCTC GATCGGTCGC
GGTCCGCTGA CGGTCAACGT CTCGGCGGCT TACACCGATA CCAAGACGCT CAAGAACCTC
TGCCTCTTCG ACGATCCGTC GTTCACCTGT ACCGCCGATG GTCCGACCGG GGAAACCAAC
CTCATCTCGG CACCCAAGGG CACCCGCCTG CCGATCACGC CGAAGTTCAA GGCGAGCGGC
ACGCTGCGCT ATACGGTTCC GATGGGCGAT GCGAAGGCAC ACTTCCAGCT CAACGGAATG
TACCAGAGTT CGGCTTCGTC GGACATCCGC ACGGCGATCT ACGAAACCTT CAGTGGCGAC
GTGATCAACC CCTCGGCCCA GCTTGGCAGG CTCAAGGCGT TCGGCACCGT CAATGCGGCG
GTCGGAGCGG ACTGGGACAG CTACTCGATC GAACTGTTCG TCTCGAACAT CTTCGACGAG
CGCGGCCAGC TTTCGCGCTT CCAGCAGTGC GGATCGTGCG GCCAGCGTCC CTATATCGTG
CCCACCACGC CGCGCATGTT CGGCCTGCGC GCGGGCGCGA AGTTCTGA
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| Protein sequence | MRMKSGPSYT ARISRLLLLA GTAISFPAMA QQAQSDAAES DPNIIIVTAQ KRSENLQNVP
ISIQALGTQK LEQLGVANFT DYAQQLPSVT FQALGGTPGT NVVYMRGVAS GGDGNHSGSL
PSVGVYLDEQ PVTTIGGNLD VHVYDIARIE SLSGPQGTLY GASSEAGTIR IITNKPDTTG
FYGSVDAEVN TVNKGGEGYK FEGMINAPIS AMAALRVVGY YQRDAGFIDN VPGTRTFLGT
PVLDENDQYA GNLPDGISVN NNAFVKKDYN YTDTYGGRAA LKVDLDDNWT VTPQVMYQKT
KSRGSYGFDP SVGDLQVQHF FPEFRNDKFV QAALTIEGKI GNWDLTYSGA YLDRRTFQSS
DYTDYAEAYD ALYANYTYEG TFYCSGLAGC FAYQDANGNT IDPRQKVIGT DHFKKLSQEL
RIASPADQPL RVVAGLFYQR QSNDIHQDYQ IANLAPNLSV NGHPGTLWLT EQKRVDKDYA
AFGEVSFDVA PTVTLTAGGR YFKYDNSLIG FFGFGRNPGD TGQYDGDPPN AAYSNRTGVA
QCFTTAGERL YDRSTDTYSS SRTLLPAAVP GGPCTNLAVY QDGTLKPVRT KDDGFTYRFN
ATWKPNSDVM LYATWSRGFR PGGINRRADV EPYKADFLTN YEVGFKSTLA GGMVRLNGAV
YQQNWKDFQF AFLGANSFTE IHNGPNARIR GVDMDASIGR GPLTVNVSAA YTDTKTLKNL
CLFDDPSFTC TADGPTGETN LISAPKGTRL PITPKFKASG TLRYTVPMGD AKAHFQLNGM
YQSSASSDIR TAIYETFSGD VINPSAQLGR LKAFGTVNAA VGADWDSYSI ELFVSNIFDE
RGQLSRFQQC GSCGQRPYIV PTTPRMFGLR AGAKF
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