| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1675 |
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| Symbol | |
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| ID | 3916250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1757069 |
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| End bp | 1758697 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640444416 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_496949 |
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| Protein GI | 87199692 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.184674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTGA TGCTGGCAAT GGCCAACGTC ACCACTTCCG CGCCCCGCGC CGTCGCACCC
GCCTATGACC CGCGCCTGGT AAGGGCCGCC GTCGCCATGA ACGAGAACGA CCTGCCCACG
GCCGAACCCT TGCTGCGCGC CCTGCTGAAG GACGATCCGT TCGATGTCAG GGCGATCCGG
CTCTTTGCCG AACTGGCCGG GCGGATCGGG CGCTATCAGG ATGCGGAAAA CCTCCTGCGC
CGGGCGATAG AACTGGCGCC GCAGTTCACC GCCGCGCGCG CCAACCTCGC GCTCGTGCTA
TATCGCACGA ACCGCGCGCC CGAGGCGCTT GAAGAGCTCG CCAAGGTGAC CGCCGATGAT
CCCGAGAACG TCGGACATGC CAATCTTCAG GCCGCCGCCT ATGGCCGCAT CGGCGAGTTC
GACGAGGCGC TTGCCCTCTA CGAGCAGGTC CTGAAGCAGG CGGCGGCCCA GCCGCGCGTG
TGGATGAGCT ACGGCCATAT GCTCAAGACC GTGGGCCGTC AGGCCGATGG CGTCGCCGCC
TATCGCCGCG CCATCGAACT CCTGCCGACG CTGGGAGAGG CGTGGTGGAG CCTTGCCAAC
CTCAAGACCG TGCGCTTCGA CGATGCCGAT ATCGCAGCGA TGGAAGCCGC GCTGCGCGTT
CCGGACCTTG CGCCGGAAGA CCAGTGGCAC CTCGATTTCG CGCTGGGCAA GGCGTTCGAG
GATCGGGGTG AGGCGGAACG ATCGTTTCGC CATTACGCCG CCGGCAATGC CCTGCGGAAG
AAGCGCATGC CCTATCAGGC GGAAGAGATC ACCGCGCAGG TCGACCGCGC TGTCGCCGCC
TTCACGCCCG CCACGGTCGC CGGGCTTTCC GGCAAGGGGT GCGAGGCGGG CGATCCGATC
TTCGTGCTTG GAATGCCGCG CGCGGGGTCG ACCCTGGTCG AACAGATCCT GGCCAGCCAC
TCGATGGTCG AAGGTACCAG CGAACTGGCC GACATCGGCT ACCTTGCGCG GACCGTCGAG
GGCTATCCAG CCGGTCTTTC GTCGTTGCAG GGCAATGACT TGCGAGCGCT AGGGGAGCAA
TACCTCGCGC GCACCCGCAT CCAGCGGCAT ACCGACCGGC CACTGTTCGT CGACAAGATG
CCGAACAACT GGATCCATGT CCCCTTCATC CGCGCGATCC TGCCCAACGC CAAGATCGTC
GACGCCCGGC GCCATCCGCT TTCCTGTTGC TTTTCAAACT TCAAGCAGCA CTTCGCGCGC
GGGCAGGGGT TCAGCTACTC GCTCGAAGAC ATGGGCCGCT ACTACCGCGA CTACGTGCGC
GCGATGGCTC ATTTCGACAA GGTCATACCC GGGGCTGTCC ATCGCGTGAT CTACGAGCGA
ATGGTCGAGG ATACCGAGGC GGAAGTGCGT GCGCTGCTGG CATATTGCGG GCTGGCCTTC
GAGGACAACT GCCTCGCCTT TCACCGGACC GAGCGGGCCG TCCGCACGGC CAGTTCCGAG
CAGGTCCGCC AGCCCATCTT CAGGGACGGC ACAGATGCGT GGAAGGCCTT TGAACCCTGG
CTAGGTGAAC TCAAGGTCGC GTTAGGTGCC GTTCAGGACT TCTACCCCGA AGCGCCTCCG
TTCGACTGA
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| Protein sequence | MFVMLAMANV TTSAPRAVAP AYDPRLVRAA VAMNENDLPT AEPLLRALLK DDPFDVRAIR
LFAELAGRIG RYQDAENLLR RAIELAPQFT AARANLALVL YRTNRAPEAL EELAKVTADD
PENVGHANLQ AAAYGRIGEF DEALALYEQV LKQAAAQPRV WMSYGHMLKT VGRQADGVAA
YRRAIELLPT LGEAWWSLAN LKTVRFDDAD IAAMEAALRV PDLAPEDQWH LDFALGKAFE
DRGEAERSFR HYAAGNALRK KRMPYQAEEI TAQVDRAVAA FTPATVAGLS GKGCEAGDPI
FVLGMPRAGS TLVEQILASH SMVEGTSELA DIGYLARTVE GYPAGLSSLQ GNDLRALGEQ
YLARTRIQRH TDRPLFVDKM PNNWIHVPFI RAILPNAKIV DARRHPLSCC FSNFKQHFAR
GQGFSYSLED MGRYYRDYVR AMAHFDKVIP GAVHRVIYER MVEDTEAEVR ALLAYCGLAF
EDNCLAFHRT ERAVRTASSE QVRQPIFRDG TDAWKAFEPW LGELKVALGA VQDFYPEAPP
FD
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