Gene Saro_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1650 
Symbol 
ID3918759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1725915 
End bp1726571 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID640444391 
ProductTetR family transcriptional regulator 
Protein accessionYP_496924 
Protein GI87199667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGC CGCCACTATC CCGCAAGCGC AAGGTCGATG TCGAACGCCG GGCCGAGATC 
GGTCGCGAGC GCCGCGCCCG CACGCGCGCT CGCATCCTTG CTGTCACCTT CGACATCTTC 
GGTCGTGAGA ACGGGCTCTA TTGCCGGGTC GAGGAAGTCT GTGCGGCGGC GGGAATTACG 
CGCCAGACCT TCTACAACCA CTTCACGGGC ATGGAAGACC TGCGCGAGGC GCTGACATGG 
GAAGTCAGCC ACGATTTCCT CGTCGCCGTG ACAGCTTCGA TCGACGCCAT GCCCGATGCG 
GCGCGGCGCA CCGCCGCCGC TGTCCGCTAT TACCTCGAGC GGGGGCGCGT GGACCCGCGC 
TGGGCCTGGT CCATCGTCAA CCTCTCGGCA AACGGCGTGG TCTTCGGCGC GGAAACCTTT 
GCCCAGGCCC GAAGGACCAT AGCAGAAGGC ATCGAGGCAG GCCTGTTCAC CGTATCGGAC 
GACAGGATCG GACGCGACAT CGTCATGGGC GCGACGCTTT CCGCGCTGTT CACGCAACTG 
CGCGAAGCTA CGCCTGACGA CTACCCCCGC CAGGTGGCAG GCGCGGTCCT TGCCGCGCTC 
GGCTGCGATG CCTCCCGATG TGCCGCCGTC GCGGCCTTGG CCTTGCCGCA CCTTTGA
 
Protein sequence
MNAPPLSRKR KVDVERRAEI GRERRARTRA RILAVTFDIF GRENGLYCRV EEVCAAAGIT 
RQTFYNHFTG MEDLREALTW EVSHDFLVAV TASIDAMPDA ARRTAAAVRY YLERGRVDPR 
WAWSIVNLSA NGVVFGAETF AQARRTIAEG IEAGLFTVSD DRIGRDIVMG ATLSALFTQL 
REATPDDYPR QVAGAVLAAL GCDASRCAAV AALALPHL