| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1649 |
|---|
| Symbol | |
|---|
| ID | 3918758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1725007 |
|---|
| End bp | 1725918 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640444390 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_496923 |
|---|
| Protein GI | 87199666 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACCC CAGCCTTCAA TCGCTACGCC CTCTACGGAG AACAGGGAGT TTCTCTTCCG
CCGGAGTTCG TGCACCTCGA ACGGATCTAC GATCGGTCGA GCGTGAACGA ATGGACGATC
GAGCCACATG CGCATCCCCA CATGGTGCAA CTCCTGCTGG TCGAGGAAGG TGGTATGGAA
CTGGCTGGCG AGAGCGGCCG AAGCCTCCTG CGGGCCCCGG CACTGATCCT TGTTCCGCCA
TCGTGCATCC ACGCCTTCCG CTTCGATCCC GGTGCCGAGG GTTGGGTGCT GTCGCTTGCC
GCGACACTCG CCAATGATCC CCGGCTCGCC GGTCTGCTCG ACGCCCTGCC AGCGCTGAAG
GGCAGCAGCA AGGCGGTGCC GCTCGACGGC ATGCCCGCGA TGGCGGCACG CCTGCGCTGG
CTGCTGGCCG ACCTTGCGCT GAGGCTGGGG CAGGGGGGGC AGGCCGGGCC GGCGTTGCTG
GCCCATGTCG CGTTCGTCCT GGCGACGGCG GGCGAAGCCG CGTCGCTTGC CGAAGGGCAG
GGCTTGCCTG ACGGGCGCGA ACCTCTGGTG GCCCGCTTTC GCACGCTGGT GGAAGAGCGC
TATCGCGACC ACTGGCCGGT CACCGCCTAT GCAAGCGCAC TCGGCACCAC GCCATCGACG
TTGACCCGCG CCACCCGCCT GTTGGCAGGC AAGGCGCCGG CCGACATGGT TCACGACCGC
CTGCTTCTCG AAGCGAAGCG CAACCTGGCC TTCACCGGCG CCACCGTCGC CCAGATCGCC
TATGCCCTGG GATTTGCCGA TCCGGCCTAC TTCGCCCGCT TCTTCAAGGC ACGCACGGGT
TTCACTGCGA GCGATTTCCG GAAAAACCGC GCGTGGACGA GCGTCGAAAT GCGCGATAAT
CCGCCCGCAT GA
|
|---|
| Protein sequence | MRTPAFNRYA LYGEQGVSLP PEFVHLERIY DRSSVNEWTI EPHAHPHMVQ LLLVEEGGME
LAGESGRSLL RAPALILVPP SCIHAFRFDP GAEGWVLSLA ATLANDPRLA GLLDALPALK
GSSKAVPLDG MPAMAARLRW LLADLALRLG QGGQAGPALL AHVAFVLATA GEAASLAEGQ
GLPDGREPLV ARFRTLVEER YRDHWPVTAY ASALGTTPST LTRATRLLAG KAPADMVHDR
LLLEAKRNLA FTGATVAQIA YALGFADPAY FARFFKARTG FTASDFRKNR AWTSVEMRDN
PPA
|
|---|
| |