Gene Saro_1615 details

Gene Information

• Locus tag: Saro_1615
• ID: 3918723
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1684254
• End bp: 1686080
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640444355
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_496889
• Protein GI: 87199632
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGTCG CCGTGGCGGT ATTCGACCGC GAAATGCGCT ACATCGCCTG CAGCCAGCTT 
TGGCTTAGCG AACATCGCAT GGCCGAGGCC GATGTCGTCG GGCGCCTGCA CTACGATGTG 
TTTCCCGACA TATCGGATAC CTGGCGTGCA ATTCATCAGC GCGCGCTTGC CGGCGAGACG 
CTTTCCAGCA GGCTGGATCG CTACGAGCGT GCGGACGGAT CGTCTGACTG GGTCCAATGG 
AACATCCAGC CCTGGCACAC CGGAAAGGGC GACATCGGCG GGGTCGTGAT GTTCGCCCGC 
GTCGTCACCA ACGAGATCGA AGCCGATCAC CAGAAGCACC TCCTCGGTCG GGAACTGGAC 
ATGCTGATCG ACGGCGCCGT CGATTATGCG ATCTTCATGC TCGACGAAGC GGGGCGGGTC 
TCGCTGTGGA ACCGAGGGGC GGAACGTCTC ACCGGATGGT GCCAGGCCGA CATCGCGCAA 
AGCCACTACG AAAAGCTCTT CGTACAGGCC GATATCGATG CCGCGCTTCC GATCCTGCAG 
CTCAGGATGG CGGAGATCGT AAACAGCTAC CGCGGGCGCC ATTTCATCGC GCGCCGCGAC 
AGCACCGTGA TCCTCGCCGA CGTCATCCTC ACCCCGATCC GCAGCGAGGG CAGGCTCACC 
GGGTTCGGCG TCGTGCTTCG CGACGTGACG GGTGAGATGG AAAAGGCGAG GGAGGCCGAG 
GCGCGGGAAG CGCAACTGCG GGCCATTCTC GATACCGTAC CGGATGCGAT GGTGGTGATC 
GACGAGGATG GTTCGATCCG CTCGTTCAGC GCGACCGCTG AAAAGATGTT CGGCTACACC 
GCGCAGGAGG TTCTCGGGCA GAACGTCGCG ATGCTGATGC CCGCGCCCGA CAGTTCGCGC 
CACAGCGATT TCCTGCGCAG TTACCGGGAG ACCGGGATCC GCCGCATCAT GGGCCAGACC 
CGCCGGGTGT TCGGCCGTCG CAAGGACGGC ACGACATTTC CGCACGAGCT GACAATTGGC 
GAGGCGATGG GCGGAGGACG ACGCCTGTTC ACCGGCTTCC TGCGCGACCT GACCGAGCGC 
GAGGAGGCCG AGGAGCAGTT GCGCCAGCTT CAGGCCGAGC TTGTCCGCAT TTCCCGGATC 
TCGGCAGTGG GGACCATGGC GACCGCGCTT GCGCACGAGT TGAACCAGCC ACTCACTGCA 
ATAGCAAACT ATGTCCTCAC TTCCGCCACG CTGCTGGCCG ATCCGGGCGA GGACACGATC 
GAGATAGTGC GCGAGGCGCT GGAGGAGGCG GGGCAAGAGG CGGTGCGAGC AGGGGCGATC 
GTGCAGCGCC TGCGGGCTTT CGTGTCTCGC GGCGAACTGG ACCGCACGAT CGAATCCCCG 
GCAATTCTCG CGGCGGAGAC GCTGGCCCTT TCCGGTCTTG CGGGGCGCCG CCGGCACGTG 
TCGGTGGAAG TGGCGGTGCC CAGGACGCTC GGCGAAGTCC TCGTGGACAA GATCCAGATC 
CAGCAGGTGC TACTAAATCT TGTGCGCAAC GCGTTCGAGG CGCTGGAAGG ACAAGGCCAG 
ATACGCGTCG GCGCAAGGGA AATCGCGGGC GGCATGTTGC AGTTCACCAT CGAGGACGAC 
GGTCCCGGCA TCGACCCAGA ACATCAGGCG GACCTGTTCG AACCTTTCGT CAGCACGAAG 
GAGAACGGCA TGGGCATCGG CCTCGCGATC TGTCGGACCA TCGTCGAAAG CCACGGGGGC 
AAGCTCTGGC ACGAGATGCG GAATGACGGC GGCACTGCCT TCCATTTCAC CATTCCCACC 
ATCCGCGGAG CGCTCGAGAA TGACTGA 

 

Protein sequence

MPVAVAVFDR EMRYIACSQL WLSEHRMAEA DVVGRLHYDV FPDISDTWRA IHQRALAGET 
LSSRLDRYER ADGSSDWVQW NIQPWHTGKG DIGGVVMFAR VVTNEIEADH QKHLLGRELD 
MLIDGAVDYA IFMLDEAGRV SLWNRGAERL TGWCQADIAQ SHYEKLFVQA DIDAALPILQ 
LRMAEIVNSY RGRHFIARRD STVILADVIL TPIRSEGRLT GFGVVLRDVT GEMEKAREAE 
AREAQLRAIL DTVPDAMVVI DEDGSIRSFS ATAEKMFGYT AQEVLGQNVA MLMPAPDSSR 
HSDFLRSYRE TGIRRIMGQT RRVFGRRKDG TTFPHELTIG EAMGGGRRLF TGFLRDLTER 
EEAEEQLRQL QAELVRISRI SAVGTMATAL AHELNQPLTA IANYVLTSAT LLADPGEDTI 
EIVREALEEA GQEAVRAGAI VQRLRAFVSR GELDRTIESP AILAAETLAL SGLAGRRRHV 
SVEVAVPRTL GEVLVDKIQI QQVLLNLVRN AFEALEGQGQ IRVGAREIAG GMLQFTIEDD 
GPGIDPEHQA DLFEPFVSTK ENGMGIGLAI CRTIVESHGG KLWHEMRNDG GTAFHFTIPT 
IRGALEND