Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1587 |
Symbol | |
ID | 3918695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1645775 |
End bp | 1646542 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640444327 |
Product | TetR family transcriptional regulator |
Protein accession | YP_496861 |
Protein GI | 87199604 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0494603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTAA GGTCGGCCGC GACGGGGGAA GCGCTTCGCG CGGAGCGTGG GGCCCCGTGT GATGTCGCGG AGATTGCCCC CTTGTCCGAA ACCGAAGCTT TCGACACCCA GCGTGCAGAT ATGGAAACTG CCTCGAAGCC CGCGCGCCGC AGTCGCGCGG AAAGCCGCGA GCAGGCGATC AACCAGATCA TCGACATCGC GACGAACGAA TTTGTCGAGA AGGGGCTTGC CGGGGCCCGT ATCGATGAAA TCGCGGGCAA GGCGACCAAG CGCAAGATCT ACTACTACTT CGAGGGCAAG GACGAGCTGT ATCGCGCCGT GCTGGAGCGG GCATACCGCC GGGTGCGCGA GAGTGAATCG CAAGTCGACG TCGAAAGCGG CAGCGCCGCC GACGCACTGC GCCGCCTGAT CGAGCATGAC GTGCGCTACC ACGCGCGCCA CCCCGAGCTT GTGCGCCTGG TGATGAACGA GAACATCCAC CGCGCCGAAC ACCTCAAGCA GATCGATACC CTGCCGCAGG GCAACCGGCG GGTCATCGAG ATACTCGAGC GGATCATCGA ACGCGGCGTC GCCGAAGGGC AGTTCCGGGC CGGGATCGAC CCGGTGGACC TGCACCTCAA CATGACCGCG CTCAGTTTCT ACAACGTCTC CAACCAGTTC ACCTTCGCTC ACAACTTCGG GGTCGACATG ACCAGCCCCG CAGCGATCGA GCGCCGGGCC GGGCAGGTGG CGGACATCAT CCTGGCCTGG GTGACGAAGA AGGACTGA
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Protein sequence | MPLRSAATGE ALRAERGAPC DVAEIAPLSE TEAFDTQRAD METASKPARR SRAESREQAI NQIIDIATNE FVEKGLAGAR IDEIAGKATK RKIYYYFEGK DELYRAVLER AYRRVRESES QVDVESGSAA DALRRLIEHD VRYHARHPEL VRLVMNENIH RAEHLKQIDT LPQGNRRVIE ILERIIERGV AEGQFRAGID PVDLHLNMTA LSFYNVSNQF TFAHNFGVDM TSPAAIERRA GQVADIILAW VTKKD
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