| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1580 |
|---|
| Symbol | |
|---|
| ID | 3917255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1636020 |
|---|
| End bp | 1637672 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640444320 |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein-like |
|---|
| Protein accession | YP_496854 |
|---|
| Protein GI | 87199597 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC AGCAGAACTG GGATATCGAA GCGGACGTCG TGGTCCTCGG CTCGGGCGGC
GCCGCAATGA CGGCCGCCAT CGCGGCGCAT GATTTCGGCG CATCCGAGGT GGTGATCCTC
GAGAGGTCGG GCATGGTCGG CGGCACGACC GCGATGTCCG GCGGGATGCT GTGGATTCCC
AACAACCATC ACATGCACGA GGAAGGCATC GAGGATTCCG ACGAGGAGGT CGTGACCTAT
CTCGATTCCC TGGCCCCGGG CGCGCTCGAT CCCGAAACGC TCTGGTCGTT CATGCAGAAC
GGCCCGGAAA TGCTGCGCTA CCTTGCGGAA CGCACGCCGG TCCGCCTGCG TGCGTTCAAG
GACTTCCCCG ATTACCAACC CTATTCCCCC GGCGCGAAGC CGGACGGCGG GCGCTCGCTC
GACAACGAGG CGTTCTCGTT CGAGCGGCTG GGCAAGTGGG CCGGAAGGGT CAATCCCAGC
AAGATGGCCT ATCCCCTGCG CGGCAGCCTG ATGGAGGCGA TCAGCGGTTC GCTGGACGAA
GCGACGCTGG CGGAACGCGA GGCTGGCGAC TATCGCGGAC TGGGGCAGGC ACTCGCCGGC
GCGCTGTTCA TGGCCGTGCT GGATCGCAAC ATCCCCGTCG AATTCGAGAA GCGCGCCCGC
AAGCTCGTCA AGGACGGCGA CAGGGTGATC GGCGTCATCG CCGATGACGC CAACGGCAAG
CCTTTCCGCG TCCGTGCACG ACGCGGTGTG GTGATCGCCA CCGGTGGCTT CGAGTGGAAC
GAGACTCTCG TGAAGGCATT CGTGCGCGGG CCGCTCACCG GCCCGGTCAG CGTGCCCGAG
AACGAAGGTG ACGGCCTGCT CATGGCGATC GAGGCCGGTG CGCAACTCGG CAACATGCAG
AATGCGTTCT GGATGCAGAG CGTGCTAGAG TTCAAGCCGC AGCACCGCAA TGCCAAGCCG
AACTACCTGC TCGGCTCGGA CGAGCGCGCC CGGCCCGGCG CGATCCTCGT GAACCGCGCC
GGCAAGCGCT TCGTCAACGA GGCGGCCAAC TACAACGCAC TCGGCAAGTC GCTCCACGCC
TTCGACGCGG GCACGCACAC ATATGCGAAC CTGCCGTACT GGTTGATCAT CGACCAGCGT
TACAAGGACA AGTACCACAC CTTCAACTCG CCTCCGGGCG GGCCGACGCC TTCCTTCATG
ATGAAGGCCG ATACGCTCGA GGAACTGGCC GAGGTCGCCG GTATCGATCC GCAAGGCCTG
GTCGCTACAG TTGCGCGGTT CAACGACATG GTGCGCAAGG GCCACGACGA CGACTTCAAT
CGCGGCGACA ACTCCTACGA CAACTTCTAC ATGTGGGGCG ACACCGACTT CGACCCGCCC
TACCGCACGC TCGGCGTGAT CGACCAGGGG CCGTTCTATG CGGTGAAGAT GGAAGCAGGC
GCTCTCGGCA CGGCGGGCGG ACCCAGGACC AATGCCGACG CGCAGGTGGT CGACTGGAAC
GGCAATCCGA TCCCGGGGCT CTACGCGGCA GGCAATGCGA TGGCGGCGGT GCTGGGCGAG
ATCTACGGCG GCGCGGGCGG CACGCTGGGC CCGGGCCTGA CCTTCGGTTA TGTCGCGGGC
CGCCATCTCG GCAGCCACAT CTCGAACCAC TGA
|
|---|
| Protein sequence | MSEQQNWDIE ADVVVLGSGG AAMTAAIAAH DFGASEVVIL ERSGMVGGTT AMSGGMLWIP
NNHHMHEEGI EDSDEEVVTY LDSLAPGALD PETLWSFMQN GPEMLRYLAE RTPVRLRAFK
DFPDYQPYSP GAKPDGGRSL DNEAFSFERL GKWAGRVNPS KMAYPLRGSL MEAISGSLDE
ATLAEREAGD YRGLGQALAG ALFMAVLDRN IPVEFEKRAR KLVKDGDRVI GVIADDANGK
PFRVRARRGV VIATGGFEWN ETLVKAFVRG PLTGPVSVPE NEGDGLLMAI EAGAQLGNMQ
NAFWMQSVLE FKPQHRNAKP NYLLGSDERA RPGAILVNRA GKRFVNEAAN YNALGKSLHA
FDAGTHTYAN LPYWLIIDQR YKDKYHTFNS PPGGPTPSFM MKADTLEELA EVAGIDPQGL
VATVARFNDM VRKGHDDDFN RGDNSYDNFY MWGDTDFDPP YRTLGVIDQG PFYAVKMEAG
ALGTAGGPRT NADAQVVDWN GNPIPGLYAA GNAMAAVLGE IYGGAGGTLG PGLTFGYVAG
RHLGSHISNH
|
|---|
| |