| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1559 |
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| Symbol | |
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| ID | 3917234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1615327 |
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| End bp | 1617519 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640444299 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_496833 |
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| Protein GI | 87199576 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.224366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATGA AGAGGGTAGC ACACCTGCGG CTCGTGGCCG TACTGGGAAC GAGCGCGCTG
GCACTTCTCG CCGGTGGACA GGCTTACGCG CAGGAAGCAG TGGCACCGCA GGAGCAGGCC
ACCGAGGCAT CGGTGTTCGG CGACATCGTC GTCACCGCCA CCAAGAAGGC GAACGCGCAG
AACGTGCAGG ACGTGCCGAT TGCCGTCACC GCTTTCGGCT CCGAACAACT CGAAAGCCAG
CACGTGCGCA CGCTCGACAA CCTGGGCTAT AGCGCACCCA ACGTGCAGCT CGACGACGTC
GGCACCGCAC CAGGCTTTGC CAATTTCTCC ATCCGCGGCC TTGGCATCAA CAGCTCGATC
CCCTCTATCG ATCCAACCGT CGGCGTATTC GTCGACGGCG TCTACATGGG CATCAGCGCC
GGCATCCTGT TCGACACCTT CGACCTCGAA GGCGTCGAAG TGCTGCGCGG CCCGCAGGGC
CTGCTGTTCG GCCGCAACGT GACGGGCGGC GCGGTCGTGG TGCGCACATC CACCCCCGGC
AACGACCTCA AGATCGAAGG GCGCCTAGCT GCGGAAACCG GCCTCAACAA GATCGCCAGC
GCAGTGGTCT CCGGGCCGCT GATCAAGGAC AAGCTGGCCG CCAAGGTCGC GGTCTACTAC
AATGACGACG ACGGCTGGTT CACCAACAAG TTCAACGGCA ACAAGAACTT CGGCGCTTCC
AAGACGCTGA TCGTGCGCTC CGCCCTGCGC TACACGCCGA CTTCCGAGGT TGAGGCGGTG
GCCCGTTACG AACATGGACG CGTGCGCGGC GACGGCGCGG TAGTGAGCAA CTTCGGCCTC
TTCCGCCGCG AGAGCTTCGG TATCAGCGTC GACGAGGAAG GCGTTACCCG AAACGACTGG
AACCAGGCGT CGCTGGAACT GAACATCGAC ACCGATTTCG GCAACGGCAA GATCACCAAC
ATTGCCGCAT ACCGTGACTT CAAGGGCTTC GTGACGAGCG ATATCGACTC CTCGCCCAGC
TACACCTTCC ACGCAGACAC GCTCACCCGG CAAGACCAGT GGAGCAATGA ACTTCGCTAT
GCCGGCACGT TCGGTGCGCT GGAGCTGACC ACCGGGCTCT ACTACTTCCA GCAGGATATC
GACTACATCG AACTGCGCCG TCTTGCGGCG GGAGCGCTCA AGATCTCCGG CGGCGGCAAG
CAGCACCAGA AGACGTTCGG CGCCTTCGTT TCGACCGACT GGCACGTCAC CGATACAGTG
ACGCTGAACG GCGGCGTCCG CTATTCGTGG GAGCGCAAGA GCGCCAAGGT TGCAAATCTC
GCCGGCAACC TGTGCGACCC GATCGTCACG AAGACCTGCA GCACCTATGG TTTCTCCAAC
AGCAAGAGCT GGAGCGATCC GACCTTCCGG GTGGGCGCGC AATGGCAGCC GACGAACGAG
ACCCAGGCCT ATGCATTCTT CGCCCGCGGT TTCCGCAGCG GCGGCTACAA CTTCCGCAAT
GGCAATGCCG CAGAAGCCCC GGGGCCGTTC GACGCCGAGA AGCAGAACTC GTTCGAGGCA
GGCATCAAGC AGGACTTCGG CCGCACGCTG CGCCTGAACC TTGCGGCATT CCACAACACC
GTGCTTGGCC TGCAGCGCGA GATCATCCGC CCGGTCCTGC CGATCGGCAC GACGCAGGTC
ATTCGCAATT CCGCGAACGT CCGCATCCAG GGCATCGAGG CGGAAGCCGT GCTGCGCGTT
GGCGACCACC TCACCTTCAA CGGCCAGTTC GGCTATACCA AGGCCAAATA CACGAAGATC
CTCTACGACC TGACGGGCGA CGGCGCGATC AATGCCAAGG ACTTTGCCCT CAAGCCGCCG
CGCCTGGCAC CCTGGACCTA TGGGGTGAGC GCCAATTTCG CGCATGAAGT GACAGGTGGC
GGCGAAGTGA CGGCGCGCCT CGGCTATGCC CATCGCGATG CGGCCTGGTC GAACGATGCC
AACACCGGCC TGCTGAGCAA GGCAGACATG GTCGACGCGA ACCTCTCCGT AGAGACGGCC
GGTCGCAGGT GGAAGTTCTC GGTCTACGGC ACCAACCTGC TGAACGACCA GACCGAGGGC
AACGTCTCGA GCCTCCCGTT CTTTGCCGGA TCGACCTTCG CGTCGATCAA CAAGGGACGT
GTCGTCGGGG CCGAAGTTCT GTTCCGCTAC TGA
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| Protein sequence | MGMKRVAHLR LVAVLGTSAL ALLAGGQAYA QEAVAPQEQA TEASVFGDIV VTATKKANAQ
NVQDVPIAVT AFGSEQLESQ HVRTLDNLGY SAPNVQLDDV GTAPGFANFS IRGLGINSSI
PSIDPTVGVF VDGVYMGISA GILFDTFDLE GVEVLRGPQG LLFGRNVTGG AVVVRTSTPG
NDLKIEGRLA AETGLNKIAS AVVSGPLIKD KLAAKVAVYY NDDDGWFTNK FNGNKNFGAS
KTLIVRSALR YTPTSEVEAV ARYEHGRVRG DGAVVSNFGL FRRESFGISV DEEGVTRNDW
NQASLELNID TDFGNGKITN IAAYRDFKGF VTSDIDSSPS YTFHADTLTR QDQWSNELRY
AGTFGALELT TGLYYFQQDI DYIELRRLAA GALKISGGGK QHQKTFGAFV STDWHVTDTV
TLNGGVRYSW ERKSAKVANL AGNLCDPIVT KTCSTYGFSN SKSWSDPTFR VGAQWQPTNE
TQAYAFFARG FRSGGYNFRN GNAAEAPGPF DAEKQNSFEA GIKQDFGRTL RLNLAAFHNT
VLGLQREIIR PVLPIGTTQV IRNSANVRIQ GIEAEAVLRV GDHLTFNGQF GYTKAKYTKI
LYDLTGDGAI NAKDFALKPP RLAPWTYGVS ANFAHEVTGG GEVTARLGYA HRDAAWSNDA
NTGLLSKADM VDANLSVETA GRRWKFSVYG TNLLNDQTEG NVSSLPFFAG STFASINKGR
VVGAEVLFRY
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