Gene Saro_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1549 
Symbol 
ID3917224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1604434 
End bp1605384 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content64% 
IMG OID640444289 
Productphosphonate-binding periplasmic protein 
Protein accessionYP_496823 
Protein GI87199566 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.576695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGGA ACGGAACCTC TCGAGACCTG TGGCGACGAT TGGTCCGCTG GCTTTTCATC 
GGGATGGCGC TCGTCGCCGG CTTCCACTTG CTCCAGCTCG ATCCGCCCTT CGCCTCTCGT 
GATTTCGAGC AGCCCGTCAG GGTCGTTTTC ATTCCCGCCG ACGGTGGCAC GGCAAGTGGC 
ACCCTGGCCG ACTTCAAGCC TCTTTTCGCC GCCCTCACGG AATCGACCGG AATGCGCTTC 
GAACTCAACG TGACCCAATC TTACAGTGCT GCGGTCGAAG CCCTCTGCAA CGGCACCGCT 
GATTTGGCGT TCGTCGGACC TGCAACCTAC CTACAGGCTC ACGGCCGGCA TTGCGCGGAT 
CTGCTGGCGA CGGGCGTGCG CGATGGGCGT GCGCAGTACT ATTCGGGCAT CTTCGTGCGC 
AAGGACGCGC CCTATCGCAC TATTGCCGAC TTGCGCGGCA GCCGCATGGC GTTCGGCGAC 
ATCAATTCGA CCTCGTCCTT CATAATGCCG GTGGCCATGC TGCTCGATGC GGGGATCGAT 
CCGGCGCATG ATCTGGCTGA AGCGCGGCTG ACGGGTAGCC ATCCCAACAA TCTTGCCGCG 
CTTGCTTCCG CCCGGGTCGA TGCGGTGGCC ATGTCGTTCG ACTCGTTCGA TCGAGCCTTG 
CAGGCGGGCT TGCCCGGCCT GGATTCGGTC CGTGTTCTCG CTCGCAGCGA ACCGATGCCC 
TATCCGCCGT TCACCGTAAG CACCCGCTTA GCGCCGGACC GCCGCCGCCG GCTGCGTGAT 
GGTTTTGCGA AGCTGGAGAA AGGCCGCCGG CACCTGCCTG GTTATGCGGG GAGACAACTG 
GATCGCTACA CCGCGCACGT CAACGAAAGG GCCTTCGACG ATCTGGCAGT CAGGCTTGCT 
CCCGTGACCG GCGAACGCGT CGCGGCAATT CTCCGGCGGA CAGACAGATG A
 
Protein sequence
MARNGTSRDL WRRLVRWLFI GMALVAGFHL LQLDPPFASR DFEQPVRVVF IPADGGTASG 
TLADFKPLFA ALTESTGMRF ELNVTQSYSA AVEALCNGTA DLAFVGPATY LQAHGRHCAD 
LLATGVRDGR AQYYSGIFVR KDAPYRTIAD LRGSRMAFGD INSTSSFIMP VAMLLDAGID 
PAHDLAEARL TGSHPNNLAA LASARVDAVA MSFDSFDRAL QAGLPGLDSV RVLARSEPMP 
YPPFTVSTRL APDRRRRLRD GFAKLEKGRR HLPGYAGRQL DRYTAHVNER AFDDLAVRLA 
PVTGERVAAI LRRTDR