Gene Saro_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1546 
Symbol 
ID3917221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1599944 
End bp1600894 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content63% 
IMG OID640444286 
Producttaurine dioxygenase 
Protein accessionYP_496820 
Protein GI87199563 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCA TCACCACTTA TGCCAATGCC AAGGACCCCA ACTCTCCTCT CGACATCGTT 
CCGGTCACAG GAACCATCGG TGCGGAAATC CGCGGCGTGA CGCTGTCCGG CGATCTTGAT
GCCGGGACCG TCCAGGCGAT CAAGGATGCC GTCGTGCGCC ACAAGGTCGT GTTCTTCCGC
GGCCAGAAGG ACCTTGACGA TGCACGACAT GAAGGCTTCG CCTCGTTGTT CGGAGAGCCG
GTCGCACATC CAACCGTGCC GGTCGCGGAA GGTTCGCGCT ATCTGCTCGA ACTCGACAGC
AAGGAAGGCT ACGCGGCCTC GAGCTGGCAC ACCGACGTGA CCTTCGTCGA TTCCTATCCC
AAGGGCTCGA TCCTACGCGC GATCACTGTT CCTGAAGCGG GCGGGGATAC CGTCTGGGCG
AATGGTGAAA CCGCCTACGA AAGCCTACCG GAATCCCTTC GCCAACTGGT GAACAACCTT
TGGGCGGTCC ACACCAACCT TTACGACTAC GCCGCCGTCC TCAATGCACC CAAGGGCGAC
GAGACCGAGC GCGAGCGCGT GAACTTCCAC AAGAGCGTGT TCGCATCGAC CGTCTACGAG
ACCGAGCACC CCGTGGTCCG CGTCCACCCC GTCTCGGGCC AGCGCAGCCT GCTGCTGGGT
CATTTCGTGA AGCAATTCGT CGGGCTCAAC CAGGCGGACT CCTCGCGCCT GTTCCAGATC
CTGCAGGATC ACATCACCCG GCCCGAAAAC GTCGTGCGCT GGCGCTGGCA GCCGGGTGAT
GTGGCGTTCT GGGACAACCA GTCGACCCAG CACCGTGCCG TCGCCGACTT TGGTCTGCAG
CGTCGCACCC TGCGCCGCGC TACTATTGCA GGTGAAGTGC CGGTCGGCAT CGACGGTCGC
CAGAGCCGTA CCGTGCGGAA GGAAAAGGCC ACCGAATACC AGCCCGCCTG A
 
Protein sequence
MTAITTYANA KDPNSPLDIV PVTGTIGAEI RGVTLSGDLD AGTVQAIKDA VVRHKVVFFR 
GQKDLDDARH EGFASLFGEP VAHPTVPVAE GSRYLLELDS KEGYAASSWH TDVTFVDSYP
KGSILRAITV PEAGGDTVWA NGETAYESLP ESLRQLVNNL WAVHTNLYDY AAVLNAPKGD
ETERERVNFH KSVFASTVYE TEHPVVRVHP VSGQRSLLLG HFVKQFVGLN QADSSRLFQI
LQDHITRPEN VVRWRWQPGD VAFWDNQSTQ HRAVADFGLQ RRTLRRATIA GEVPVGIDGR
QSRTVRKEKA TEYQPA