| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1533 |
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| Symbol | |
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| ID | 3917208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1577488 |
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| End bp | 1579650 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640444274 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_496808 |
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| Protein GI | 87199551 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.63878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGCA GTTACTGTAA GATTCTTTTG GCGACCGCCA GCCTTGCAGC AGTCACTGTT
GCTGCACCCG CTATGGCGCA AGAGACTGTG GGCCAGGGCG CGGTGCAGAA CGATGATGGA
TTGACCGACA TCGTTGTTAC CGCGACGAAG CGGGGGGCGG CACAGAACGT TCAGAACGTT
CCGATCGCAA TTACCGCATT CGGGGTCAAC GAGCTGGACA GCATCCACGC CCGATCGATC
GCCAGTGTCA GCTACGCGGT GCCGAACGCG TCGTTCGAGA GCCCGGGGAC GACCCCAGGC
TACGCAAACT TCACGATCCG CGGCCTCGGC ATCAACAGTT CGATCCCTTC AATCGACCCG
ACGGTAGGCG TTTTCGTCGA TGGCGTTTAC CTTGGCGTGA GCGCTGGCGT TCTCTTTGAT
ACCTTTGATC TCGAGGGGGT GGAAATCCTG CGCGGGCCGC AGGGGCTGCT GTTCGGCCGC
AACGTCACTG GCGGCGCGGT TCTGTTGCGC ACAACCACCC CTTCGAACCG GTTTCGTATG
GACGCCAGGG CCAGCCTTGC GACAGGGCTT GAAAAGCGGG CCAGCATCTC GGTATCCGGG
CCGCTTGCTG GCGACGTCCT GAGCGGAAAG ATCGCCGTCT ACTATAACGA TGACAATGGC
TGGTTCAAAA ACGACTTCGA CGGCAAGAAG ATCGGCGGCA GCGAAACGCT GATCGTTCGG
CCCGCGTTGC GCTACCAGCC TAACGATGGC GTGGACCTCG TTCTGCGCTA CGAGCATGGC
CGGATGCGAG GTGACGGCGC GGTCTCCTCC AATCACGGGC TTTACCCGCG CGACAGCTTC
GGCGTGAACC AGAACTATGT CGGCTTCATC AAGGCAGACT GGGACCAGGG CGTCAGCGAG
CTCAACGTCG ATACCGGCTT CGGTGACGGG AAGATCACCA ACATCGCGGC TGTCCGCGCC
ATCGATAACG ATGCGGGTAC CGATATCGAC GCTTCTCCCG CAACTGCACT GCATGCCCGT
AACAAGATCA AGCAATGGCA GTTCAGCAAC GAACTGCGTT ACGCAGGCAC CTTCGGTGAT
GTCGATGTGA CGACCGGTCT GTTTTACTTC TATCAGGATC TTCAATACGC CGAGCAGCGC
CTTCTTTCGG GCGGCGCGCT GACCGTATCG GGCGGTGGAC GTCAGAAGCA GCACACCGGT
GGCGTTTTCG CCAACCTCGA CTGGCATGTT AGCGACATGC TGACGCTCAG CGCAGGCGCG
CGCTATTCGG CCGAAGAGAA GGCTGTCCGG GTGCGCTCGA TCGGCGTGGC GGGCTGTGAT
CTCGATGCCT TGCGGTGCAG CTTCAACTTC ACCGACAAGC ACAGCTGGAG AGGCTTTACC
CCACGTCTCG GTGTGCAGTT CAAGCCGAAC GATGACACGA TGCTGTATGC GTCCTTTGCG
CAGGGCTTTC GCAGCGGCGG GTACAACTTC CGCAATCTCA ATCCCAACGT GAACCCGGGA
CCGTTCAACC AGGAACGCCA GAATGCATAC GAGGTCGGTC TGAAGCAGGA ATTCGGCCGC
ATTGCGCGCG TCAACATTGC CGGCTTCTAC AACAAGATCA AAGGCGCGCA GCGTGAGTTT
CAGGCTCCGT TCCCGCCGTT TGGCAACTTC CAGATCATTA CCAATGCCGC CGACGTTTCG
ATCAGGGGGA TTGAAGGCGA ACTGCTTTTC AAACCGGCGC GCGGCCTGAC TGTTTCCGGG
CAATTCGGGT ACAGCAAGGG CAAGTATGAC AACATTCGAT TTGATCTCAA CGCCGACGGC
GCGATCAACA AGGCGGACTA TGCCCTCAAG CTGCCAAGGC TTTCTCCGTG GAGCTATGGC
GGATCGATCA CCTACGCAAC TGCTGTGGGT GATGGCTTCG ATGCGGAAGC GCGCGTTGGC
GCAAATCATC GCGATGCTTC GTTCTTCAAC GACCAGAATA CCGGCCTGCT GCCTGCGGCA
ACCATGGTCG ATGCAAACCT GTCGATCACC CATGGTCGGG CGAAGGTGTC ATTCTATGGC
AACAACCTCC TGAACGAGGT GACCTTCGCG ATCGAATCTC CGCTTCCATT CTTCCCTGGT
TCCACGTTCT CGCCTCTTAA CAAGGGCAGA ACCTACGGGA TCGAGCTTTC CTACAAGATC
TGA
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| Protein sequence | MMSSYCKILL ATASLAAVTV AAPAMAQETV GQGAVQNDDG LTDIVVTATK RGAAQNVQNV
PIAITAFGVN ELDSIHARSI ASVSYAVPNA SFESPGTTPG YANFTIRGLG INSSIPSIDP
TVGVFVDGVY LGVSAGVLFD TFDLEGVEIL RGPQGLLFGR NVTGGAVLLR TTTPSNRFRM
DARASLATGL EKRASISVSG PLAGDVLSGK IAVYYNDDNG WFKNDFDGKK IGGSETLIVR
PALRYQPNDG VDLVLRYEHG RMRGDGAVSS NHGLYPRDSF GVNQNYVGFI KADWDQGVSE
LNVDTGFGDG KITNIAAVRA IDNDAGTDID ASPATALHAR NKIKQWQFSN ELRYAGTFGD
VDVTTGLFYF YQDLQYAEQR LLSGGALTVS GGGRQKQHTG GVFANLDWHV SDMLTLSAGA
RYSAEEKAVR VRSIGVAGCD LDALRCSFNF TDKHSWRGFT PRLGVQFKPN DDTMLYASFA
QGFRSGGYNF RNLNPNVNPG PFNQERQNAY EVGLKQEFGR IARVNIAGFY NKIKGAQREF
QAPFPPFGNF QIITNAADVS IRGIEGELLF KPARGLTVSG QFGYSKGKYD NIRFDLNADG
AINKADYALK LPRLSPWSYG GSITYATAVG DGFDAEARVG ANHRDASFFN DQNTGLLPAA
TMVDANLSIT HGRAKVSFYG NNLLNEVTFA IESPLPFFPG STFSPLNKGR TYGIELSYKI
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