Gene Saro_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1524 
Symbol 
ID3917199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1568798 
End bp1569766 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content59% 
IMG OID640444265 
Producttype II secretion system protein 
Protein accessionYP_496799 
Protein GI87199542 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2064] Flp pilus assembly protein TadC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA TCCTCCAGAA CGCGCTGCTT AGATCGCTCA TTCTGGCGCT GTTTTTTGCG 
GCGACAGTCA TCGCGGCCTT CTCTGCCATC AGTTATTTTA CCCGACGTGC CCAGGTGCGC
GCGCATCTGC GCACTGTGTC GGTTGACAGC GGCGCCTCGA ACGGCGCGGA AACGAGCCTT
GCACAGAGCC GGTCCGGACC GTTCTGGAGC ATCGTCAATG TAATCGAGCG CACAGGTCTC
AGCCTCGCCG ACAGCAATCC GGACGCGCTG CGCACAAAGC TGATTGCGGC CGGCTTCGAA
GCCACCGAAG CGCCGACCAT CTATACGCTC TCCCGGCTCA TCCTCGTTTT TCTCCTGCCT
GCGTGTGCCA TTAGCTACTT GATGCTGACG GGATCCGAAC TCACCATCTT CAAGCTCTAC
ATGGTCGGAT CTGTCAGCGG GCTGCTCGGC CTCATCGCCC CTGCTTGGTT TGTGCGGATC
AAGGCAGATC GAAGGATGGA GGCGATAACC AACGGTTTCC CGAATTGCCT GGATCTCATC
CTGGTATGCG TCGAGGCTGG TCTCGGCATG GAAGCGGCAT TCGATCGTGT CAGCCGGGAA
ATCGCACGTG CAGAGCCGCA GGTCGCCCAC CTTCTAGTGC GAACCAATCT CCACTTGAGG
GCCGGCGCCA CTCGCGAGGA AGCGTTGCAC CGCATGGCAA CGCTTGCTGG CGTCGACGAG
ATCAGGTCGT TTGCGACCTT GCTTATCCAG TCCGAGAAGC TTGGCACCAG CATTGGTACC
ACTTTGCGGG TCTTTGCGTC CGAAATGCGC GAAAAACGCC GAATGCGGGC TGAGGAGAAG
GCGCATCGCC TTCCCGTCCT GATTTCCCTT CCGCTCGTAA CCTGCATGCT TCCCACCATG
ATCGGCGTGC TGATGATACC TGCCGCCATT CGCGTTGTCC GGAAACTCCT CCCTGTGATG
TTAGGATAG
 
Protein sequence
MDFILQNALL RSLILALFFA ATVIAAFSAI SYFTRRAQVR AHLRTVSVDS GASNGAETSL 
AQSRSGPFWS IVNVIERTGL SLADSNPDAL RTKLIAAGFE ATEAPTIYTL SRLILVFLLP
ACAISYLMLT GSELTIFKLY MVGSVSGLLG LIAPAWFVRI KADRRMEAIT NGFPNCLDLI
LVCVEAGLGM EAAFDRVSRE IARAEPQVAH LLVRTNLHLR AGATREEALH RMATLAGVDE
IRSFATLLIQ SEKLGTSIGT TLRVFASEMR EKRRMRAEEK AHRLPVLISL PLVTCMLPTM
IGVLMIPAAI RVVRKLLPVM LG