Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1524 |
Symbol | |
ID | 3917199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1568798 |
End bp | 1569766 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640444265 |
Product | type II secretion system protein |
Protein accession | YP_496799 |
Protein GI | 87199542 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTA TCCTCCAGAA CGCGCTGCTT AGATCGCTCA TTCTGGCGCT GTTTTTTGCG GCGACAGTCA TCGCGGCCTT CTCTGCCATC AGTTATTTTA CCCGACGTGC CCAGGTGCGC GCGCATCTGC GCACTGTGTC GGTTGACAGC GGCGCCTCGA ACGGCGCGGA AACGAGCCTT GCACAGAGCC GGTCCGGACC GTTCTGGAGC ATCGTCAATG TAATCGAGCG CACAGGTCTC AGCCTCGCCG ACAGCAATCC GGACGCGCTG CGCACAAAGC TGATTGCGGC CGGCTTCGAA GCCACCGAAG CGCCGACCAT CTATACGCTC TCCCGGCTCA TCCTCGTTTT TCTCCTGCCT GCGTGTGCCA TTAGCTACTT GATGCTGACG GGATCCGAAC TCACCATCTT CAAGCTCTAC ATGGTCGGAT CTGTCAGCGG GCTGCTCGGC CTCATCGCCC CTGCTTGGTT TGTGCGGATC AAGGCAGATC GAAGGATGGA GGCGATAACC AACGGTTTCC CGAATTGCCT GGATCTCATC CTGGTATGCG TCGAGGCTGG TCTCGGCATG GAAGCGGCAT TCGATCGTGT CAGCCGGGAA ATCGCACGTG CAGAGCCGCA GGTCGCCCAC CTTCTAGTGC GAACCAATCT CCACTTGAGG GCCGGCGCCA CTCGCGAGGA AGCGTTGCAC CGCATGGCAA CGCTTGCTGG CGTCGACGAG ATCAGGTCGT TTGCGACCTT GCTTATCCAG TCCGAGAAGC TTGGCACCAG CATTGGTACC ACTTTGCGGG TCTTTGCGTC CGAAATGCGC GAAAAACGCC GAATGCGGGC TGAGGAGAAG GCGCATCGCC TTCCCGTCCT GATTTCCCTT CCGCTCGTAA CCTGCATGCT TCCCACCATG ATCGGCGTGC TGATGATACC TGCCGCCATT CGCGTTGTCC GGAAACTCCT CCCTGTGATG TTAGGATAG
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Protein sequence | MDFILQNALL RSLILALFFA ATVIAAFSAI SYFTRRAQVR AHLRTVSVDS GASNGAETSL AQSRSGPFWS IVNVIERTGL SLADSNPDAL RTKLIAAGFE ATEAPTIYTL SRLILVFLLP ACAISYLMLT GSELTIFKLY MVGSVSGLLG LIAPAWFVRI KADRRMEAIT NGFPNCLDLI LVCVEAGLGM EAAFDRVSRE IARAEPQVAH LLVRTNLHLR AGATREEALH RMATLAGVDE IRSFATLLIQ SEKLGTSIGT TLRVFASEMR EKRRMRAEEK AHRLPVLISL PLVTCMLPTM IGVLMIPAAI RVVRKLLPVM LG
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