Gene Saro_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1520 
Symbol 
ID3917195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1564530 
End bp1565159 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content57% 
IMG OID640444261 
ProductTadE-like 
Protein accessionYP_496795 
Protein GI87199538 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTCC TGCATGCATT TCTGGGCGAT GAGCGAGGGG CGTCGGCGGC CGAATTCGTA 
CTCGTGTTGC CGATCCTGAT CCTGTTCGTC TTTGGCGTGC TGGATACCGG TTGGTACGCT 
TGGAACCTTG GCCTCAATCA GAAGGCGGCT CAGATGGGCG CACGTATCGC GGTGGTGACA 
AATCCCGTGG CGAGCGATCT TGCCCAGAAC ATGGTTGGCG TGACCTGTGG CGGGGTCACA 
TTGCAGCAGG GCCAGCCTAT TCCGGCTGGC TGCCTGCCAG CCAAGACATG TCGGTTTACC 
TCGGCCAGCG CATGTTCGTG TTCGGGCGGC GCTGCGCCGT TTGCGGCAAC GTCATGCAGC 
TTTGCCGATT TCGACCGGTT CGCCAGGGTA ATGGAAAGCG TGAATCCTGC CATTCAACGC 
AGCAATATCA CGGTGACATA TAACGGGTCC GGCCTTGGTT ATGCCGGAGA CCCGAACTCA 
AAGGGTATCG AAATTGCACC GCATGTCACC GTGACGGTGG CGGGAATGCA ATACAATCCT 
CTTATGGGAA TATTGATGAC GGGCATATCA ATGCCTTCTG CATCGAGCAC ACTCACAATG 
GAAGATGGAG ACGGCGTTAA ATCCTTTTAG
 
Protein sequence
MRLLHAFLGD ERGASAAEFV LVLPILILFV FGVLDTGWYA WNLGLNQKAA QMGARIAVVT 
NPVASDLAQN MVGVTCGGVT LQQGQPIPAG CLPAKTCRFT SASACSCSGG AAPFAATSCS 
FADFDRFARV MESVNPAIQR SNITVTYNGS GLGYAGDPNS KGIEIAPHVT VTVAGMQYNP 
LMGILMTGIS MPSASSTLTM EDGDGVKSF