Gene Saro_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1518 
Symbol 
ID3917193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1562441 
End bp1564003 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content60% 
IMG OID640444259 
Producthypothetical protein 
Protein accessionYP_496793 
Protein GI87199536 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTTA CACTGATCCG GAGTGGTCTG AAGGACGAAA CAGGCGCCGT CGCGGTGACG 
TATGCACTGG CACTGACCGG CCTGATCGCG ATGGTCGGCA TTGGCTACGA CGTCAGCCAG
GTGCTGACGC TGGACAGCGA ACTGCAAAAT GCAGCAGATC AGGCTGCACT TGCCGCAGTG
ACCCAGTTGG ATCGGCAAAG CGGTGCTATC GACCGTGCAA AGAATGCCGC AAATTCGCTG
ATCGCGAACA ACACGCTGCT GGCAAAAGAT GCCGGGGTCG TGACGATCAA GGAAGCAGGC
TTCGCATTCT ATGCCACCAG GGCAGATGCG GAAGCTGGGG CAAACCCCAC AACAGACAAT
GCGCGAGCGC GTTTTGCAAA GGTGGAGGTC AATGGCCGGA GCGCACAGTA CGCGCTCACC
CCCATTGGCT CTGCCGTAGC AAGCTGGGTT TCGCCCACTC TCTCCGCCGC AGCCGTGGCA
GGTATCGGCT CTGCAATTTG CAAGGTCCCG CCGATGAAGA TCTGCGCGCC CAGCAACGAT
CTCAGCTTCA ACCAGGATTA CGTCGGCAAA GGTCTGTTGC TCGACACTAC CTCCAATAGC
GGCTTGCAAC TCCAGTTTCT TGGTGATGCC AGCAACACGC CTTCGATCCG CAAGGCTCTT
TCGGCCGATA GTCCGACTGG CGATTGTCTC GACGAGGAAA ACCTCGCCGT AGGTTCGCAG
GCAGGCTCTG CCGTGGCCGC TGCCCTTAAC ACGCGGTTCG ACATCTACGA TGCTGGCGGC
AACTCCCAGA ACGCGTGCCC CTCTGGTGTG ACATGCAGCC CGGCGCTCAA TTCGTCCAAG
GATCTCATTC GTAAAACCAA CAGCGGTGGG GCCTGCCTTC TCAGCCAGAA TGGAACGCCC
GCAGGATCGT GGTTCTGGCC CGAACTCAGC ACATACGGCT TCGATGCGTC CGGAACCGTG
TTTCCCCTGT CGGACGTGAA GTTCATGGGG CATCCACGGG ATGATTGCCA CGCCAAGGGC
GGTGCGACCG GTTGCGGCGG CGCGACGGGC GTTGGCGACG GCGTCTGGAA CATCGACTAT
TATTTCCGCT CGAACTACGG GCTGGATTGG ACGACGCTTG GCATCTCGAT GCCAGCCGGA
AAGTCGATTC CCCGCCGTTA CGATGTCTAC AAATGGGAAC TCGCGCGCTG GGCGTCCAAT
CCGTCCGAAA AGACCCGGGC GGTGGGGAGC GACACAGCCT ATCGCGGCCC CGTCTGCAAT
ACGGCAAGCA CTCCCATATC GGGTACGGAT CGGCGCGTGT TTCCTATCGC CGTCGTCGAC
TGTACCTCTG CGGCCACTTC TCAGGTCGTG AAAAAGTGGG TGAACGTCTT CCTGGTTGAA
CCTTCGCTCA ACCGGGGCAG CGCGCCTCCC CCAAATCCGC CCAAGAATGG TCCGAAGAAG
AACTACTATC GAAGCACGGC CGCCGAAGTC TACGTAGAGG TCGTGTCCAT CGCCAAGCCG
GGCAACGATG ACGGCGGCGA TGCAAACGTC ATTCGTCGCG ACAAGCCGTA CCTTGTCAAA
TGA
 
Protein sequence
MPLTLIRSGL KDETGAVAVT YALALTGLIA MVGIGYDVSQ VLTLDSELQN AADQAALAAV 
TQLDRQSGAI DRAKNAANSL IANNTLLAKD AGVVTIKEAG FAFYATRADA EAGANPTTDN
ARARFAKVEV NGRSAQYALT PIGSAVASWV SPTLSAAAVA GIGSAICKVP PMKICAPSND
LSFNQDYVGK GLLLDTTSNS GLQLQFLGDA SNTPSIRKAL SADSPTGDCL DEENLAVGSQ
AGSAVAAALN TRFDIYDAGG NSQNACPSGV TCSPALNSSK DLIRKTNSGG ACLLSQNGTP
AGSWFWPELS TYGFDASGTV FPLSDVKFMG HPRDDCHAKG GATGCGGATG VGDGVWNIDY
YFRSNYGLDW TTLGISMPAG KSIPRRYDVY KWELARWASN PSEKTRAVGS DTAYRGPVCN
TASTPISGTD RRVFPIAVVD CTSAATSQVV KKWVNVFLVE PSLNRGSAPP PNPPKNGPKK
NYYRSTAAEV YVEVVSIAKP GNDDGGDANV IRRDKPYLVK