| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1516 |
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| Symbol | |
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| ID | 3917191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1560594 |
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| End bp | 1562147 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640444257 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_496791 |
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| Protein GI | 87199534 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCTA AGAGCCGACG CTACCTTGCC ATCGGCTCCG CGCTTGCCGC GGCACTGTGC
GCAACCACCA ATGCGACTCG TGCCCAGGGC ATCACAGCGG AAAACCTTCA CGCTGGCACG
CTGGAGGTGC CGGTCAACAA GAGCCAGGTT GTCAGCACCG ATCGCACCAT TGCCAAAGCG
CTGGTCGGTA ACGACGACAT TGCCGATGTT CTCCCGGTCA CCACCAGGTC CATCTACGTG
CTGGGCAAGA AGATGGGCAC GACCAGCCTG ACGCTGTACG ATGCCACTGG CCGCGTACTT
TCTATCATGG ATGTTGCGGT GGGCCCTGAC GTGGAGGGGC TGCGCTCGCA GCTCAAGACT
TTTGTCCCCA ACGACAAGAT CGATGCGCGC CTCTCGAACG ATGCAATCGT GCTGAGCGGC
CTCGTCAATG ATCCCGGGGC TATCGATCGC GCGGTGCAAC TGGCGCGGAC CTATGCCGGC
GACAAGGTCG TGAACCTCAT TTCGCTTGGT TCCAGCCAGC AGGTGATGCT GGAAGTGAAG
TTTGCCGAAG TGAACCGCAC CGCGGGTTTC GACGTAGGTG TCAGCGGTTT CGCCAGCAAG
GGCACGTTTG AATCCGCCAT CGGGAAGGGA GCTCAACTCG TCCCTGGCGC AGATGTGACG
GTGAGCGGCA ACTCTGGCGG TGTATCCACA TCCACAACGA TTCCCGGCGC TTCCATTCTC
AAGCTGAGTT CCATCACGGG CTCGTTCGGG ATCTTCCGCA AATCCTTTTC GATCGACGGT
CTGGGCATCG ATGCTGTCCT GAACGCCCTC GAAACCAAGG GCATGGCGAA AACGCTGGCC
CAACCAACGC TGTTGGCCCT TTCGGGGGAG CGCGCTTCGT TCCTTGCGGG CGGAGAGTTC
CCGGTGCCAG TGGTGCAAAG CGGCACGACC GGCACCGGGA ACGGCAATGG CGGCGCGATA
ACCGTTGAAT TCAAGCCGTT CGGCGTGAGC TTGGGCTTTA CCCCGACCGT GCTTGGAGAC
AAGACGATCA ACCTTCTGGT TGAACCGGAA GTCAGCGCTA TCGACCCGAC TGCATCGTTG
ACTGTCGGCA GTATCACGAT CCCGGGGCTT CGTACCCGCC GCGCCAGCAC GACGCTGGAA
TTGCGTGATG GCGAAAGCTT TGCGATCGCC GGATTGCTGC AGAAGGACTT CAAGACCAGT
GTTCAGCAGT TGCCGCTGCT TGGGTCGTTG CCGATCATAG GGAGCTTGTT CCGCTCGAGC
GCATTTTCGA AGGGCGAGAC TGAACTCCTC ATTGTCGTCA CGCCGCGGCT AGTGTCGCCG
ATCAAGCCCG AACAAGTTCG TCTGCCGACG GATGCCGTTA CCGATCCTTC GGCTGCCAGT
ACGATCTTCC TGGGTGAGCC GTCATTCGGC AAGAAACTGG CGCCCACCAA GCCGCAGGAC
GGAAGTGCGG CACCGCTTTC GAGCGATGCT ACGCCGATCC CTCCCCAGGC GAGCGTTTCG
GAACTGCCCG CCCTGCCGGC CAGCGATGCA AGGAATGCGG ACTATGCGTA CTGA
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| Protein sequence | MFSKSRRYLA IGSALAAALC ATTNATRAQG ITAENLHAGT LEVPVNKSQV VSTDRTIAKA
LVGNDDIADV LPVTTRSIYV LGKKMGTTSL TLYDATGRVL SIMDVAVGPD VEGLRSQLKT
FVPNDKIDAR LSNDAIVLSG LVNDPGAIDR AVQLARTYAG DKVVNLISLG SSQQVMLEVK
FAEVNRTAGF DVGVSGFASK GTFESAIGKG AQLVPGADVT VSGNSGGVST STTIPGASIL
KLSSITGSFG IFRKSFSIDG LGIDAVLNAL ETKGMAKTLA QPTLLALSGE RASFLAGGEF
PVPVVQSGTT GTGNGNGGAI TVEFKPFGVS LGFTPTVLGD KTINLLVEPE VSAIDPTASL
TVGSITIPGL RTRRASTTLE LRDGESFAIA GLLQKDFKTS VQQLPLLGSL PIIGSLFRSS
AFSKGETELL IVVTPRLVSP IKPEQVRLPT DAVTDPSAAS TIFLGEPSFG KKLAPTKPQD
GSAAPLSSDA TPIPPQASVS ELPALPASDA RNADYAY
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