Gene Saro_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1500 
Symbol 
ID3917175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1543701 
End bp1545002 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content63% 
IMG OID640444241 
ProductCl- channel, voltage gated 
Protein accessionYP_496775 
Protein GI87199518 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTC TGGGAAGATT CCGGCTAGCG ACCAACCAGC TCGATCGCAG GCTTTGGCTG 
ATGCGCGTGG CTGCGGTTGC AGGAGCGGTC CTGCTTGGGC TGGTCGCGAT TCTTTTTGCG
CAGGCCGGTG ATCTGGCTCA GCACGTCTTT GCCCGCATGT TCGCCGCCCA TCCCGTGTTG
GCATCTGCAT CAACCCCGTT CGTATTCGTG GCAGTGGTGG GCCTGACCCG GCGCTGGTTT
CCGGAAGCGC GTGGATCGGG AATTCCGCAG GTCATGGCGG CAAGTCACAA CCCCGCAGCA
AGCGCAAACG GCCCGTTGAT CTCGCTGCGT ACAGCGGCGG CCAAGTTTGC CGGTACGCTG
CTCTTGCTGC TTGGCGGGGG CGCGGTCGGC CGCGAAGGCC CGACAGTGCA GATCAGTGCC
GCGCTTATGA TAGCTGTGCA TCGCTGGTTG CGCATACCAG TCAATGCAGG CGTCATTATC
GCCGGGGGTG CGGCGGGTGT CTCTGCGGCC TTCAACACGC CTCTGGCCGG CGTCGCTTTC
GCGATAGAGG AACTGGCGGC AGCGTTCGAG CAGAAGGTTG CACTTCTGGT CATGGCAGCC
GTCATGATCT CAGGGCTGGT CAGCCTGGGC ATCGCTGGCG ATTACGTTTA TTTCGGTGCG
ATGACCCGGC ACATGGCAAT CCGTGACATT GCGGTCCTTG CTCCACTCAT GGGCGTGCTT
GGAGGAATCG CCGGCGGAGC ATTTTCACGC ACGCTCGTTG CCCTGTCCGG TTCCAGGCAC
CCGTGGTTCG TCAGCGCAAG GGCCAATCCG CTAAAGCTGG CCTTTGCCTG TGGCTGCGTG
GTTGCAGGGC TAGGCCTTGC CACCGGCGGC GTCAGCTGGG GCACGGGCTA CGAGACTACA
CGGACCCTGC TTAGCGGCGG GGAGGCGACT CTTTCGTTCG GACCCGCAAA GTTCGTGGCC
ACCCTTGCAA CCGCGTTGAG TGGTGCCCCT GGTGGCATTT TCGCACCATC TCTTTCGGTG
GGGGCGGGCC TGGGACAACT GGTAGCGGAC ATCACGGCAG GCGTGCCGTC CGGCGCGCTC
GTCCTGCTTG GGGTCGCAGC CTACTTTACC GGCGTGGTCC GCGCTCCCCT TACCGCAGTC
ATCATCGTGA CCGAAATGAC CGCCGATCGC GCGATGATCA TTCCGTTGTT TATCGCTGCG
CTGATTGCCG ATTGGGTCAG CAACAAGATT TGCCACGTGA AGCTCTACCA TGCGCTTTCC
CAAGGCTTCC GGCCAAGCCC TGCAAAAGAG AGTGCTGCCT GA
 
Protein sequence
MSILGRFRLA TNQLDRRLWL MRVAAVAGAV LLGLVAILFA QAGDLAQHVF ARMFAAHPVL 
ASASTPFVFV AVVGLTRRWF PEARGSGIPQ VMAASHNPAA SANGPLISLR TAAAKFAGTL
LLLLGGGAVG REGPTVQISA ALMIAVHRWL RIPVNAGVII AGGAAGVSAA FNTPLAGVAF
AIEELAAAFE QKVALLVMAA VMISGLVSLG IAGDYVYFGA MTRHMAIRDI AVLAPLMGVL
GGIAGGAFSR TLVALSGSRH PWFVSARANP LKLAFACGCV VAGLGLATGG VSWGTGYETT
RTLLSGGEAT LSFGPAKFVA TLATALSGAP GGIFAPSLSV GAGLGQLVAD ITAGVPSGAL
VLLGVAAYFT GVVRAPLTAV IIVTEMTADR AMIIPLFIAA LIADWVSNKI CHVKLYHALS
QGFRPSPAKE SAA