Gene Saro_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1498 
Symbol 
ID3917173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1540830 
End bp1542164 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content62% 
IMG OID640444239 
Productdi- and tricarboxylate transporters-like 
Protein accessionYP_496773 
Protein GI87199516 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGG AACAGATCCT GACGCTGGTG GTCCTCGTGG GCGTTGTCGC CGCGCTGATT 
GCCGACCGCA TGAGGGCCGA TGTCGTGGCG CTGAGCGGCG CTGCCATCCT GCTCGTGACA
GGGGCAGTCC GACCCAGTGA AGTCCAGGGC GCATTCGCCA GCCCCGCCAT TCTCACGCTC
GCATCGCTGT TCGTGATTGC CTACGCGATG GAACTGTCCG GCCTGCTTGA CAAGGCCATC
GAAAAAGCCG TCGTCTTCTG TCGCAGGACC GGGGCAGCGG GGTTGTGGGG CCTGATCGGC
ATGTCCGGTG TCGGGTCGGC TTTCCTGAAC AACACCCCAA TCGTGGTGGT GGTCGCACCC
GTGATCCGCG ACGTGGCAAA GTCCATCGGG CTCGATCCCC GGCGTTTCCT GATGCCGCTG
TCCTATGTTG CCGTTCTTGG TGGGAGTTGT ACGCTGATCG GAACGTCCAC CAATCTCCTC
GTCGATGACA TGGCCCGTAC ATCCGGGCAG GCGCCGTTCG GCATTTTCGA GATCACCCCG
GTGGGCCTCG CCATGGCGCT GGCGGGCGGC ATGTATCTGG TTCTGTTCAC CGGCAGGCTT
GTGAAAGGTG CCCCGGCACC GGCCGAAGAG CCAGGCAAGC CTCGGGCCCG CGCCGATATC
GAACGCCATT CTGTGAGCCA TGTGGACCTG ACCGGCGATT CACTCGAAGA CACCAAGGTC
TACGCGCAAG TCCGCGAGTA CCGGCCAAGG ATGGCGTTCA TTTCCGTGGC GATCTTCATT
GCCGTGATTG CCGTGGCGGC GATTAATCTG GTGCCGATTG CTGCAGCGGC CTTTGCCGGT
GCGGTCCTGC TCATACTGCT CCGGGTGATA TCGCCGGATC AGGCCTATGC CGGATTGCGA
CCGGAAATCC TGCTGCTGAT CGCAGGGATG GTGGTCATCG GCATCGCTAT GGAACAGACC
GGCCTTGCCG CGGAAGTGAC GCAATGGATG ATCGGCTCAG TCAATGACGT GGGCCCTTTG
ACGGCGCTGA TCTTTCTTTA TGGCGCGACG CTGCTTCTTA CCGAACTTCT GTCGAATGCC
ACCGTTGCGG TCCTGCTTAC GCCCGTCGCA GTGGCACTTG CCGAAAGCCT TGGCGTCAGC
CCTCGCCCGT TTCTCGTGAC GATCATGATG GCGGCAAGCG CCGCTTTCGC CACGCCCTTC
GGCTACCAGA CCAACGTCCT CGTCTACCAG ATGGGTGGCT ACCGCTATAT GGATTTCATG
AAGGTAGGCC TGCCGCTCAA CCTGTTGACA TGGGCCGTGG CGGTAATGGC CATACACCAC
TTCTTTCCGT TCTAG
 
Protein sequence
MTLEQILTLV VLVGVVAALI ADRMRADVVA LSGAAILLVT GAVRPSEVQG AFASPAILTL 
ASLFVIAYAM ELSGLLDKAI EKAVVFCRRT GAAGLWGLIG MSGVGSAFLN NTPIVVVVAP
VIRDVAKSIG LDPRRFLMPL SYVAVLGGSC TLIGTSTNLL VDDMARTSGQ APFGIFEITP
VGLAMALAGG MYLVLFTGRL VKGAPAPAEE PGKPRARADI ERHSVSHVDL TGDSLEDTKV
YAQVREYRPR MAFISVAIFI AVIAVAAINL VPIAAAAFAG AVLLILLRVI SPDQAYAGLR
PEILLLIAGM VVIGIAMEQT GLAAEVTQWM IGSVNDVGPL TALIFLYGAT LLLTELLSNA
TVAVLLTPVA VALAESLGVS PRPFLVTIMM AASAAFATPF GYQTNVLVYQ MGGYRYMDFM
KVGLPLNLLT WAVAVMAIHH FFPF