| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1474 |
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| Symbol | |
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| ID | 3916139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1514632 |
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| End bp | 1517085 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640444217 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_496751 |
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| Protein GI | 87199494 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.698611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGTC CAATCTTGAA TCGCACGCGC CGTTCCTGTC TGCTAATGAC ATCGGCGCTT
GTTTCGCTTT CATGCGTTCT CGTTGTTTCG CCTGCGATGG CGGCAGATGA GCCCCAGGCT
GCAAGCACAA CCGAGGATAT CGTCGTCACT GCGCGTCGTA CGTCGGAAAA GCTGTCTAAT
GTGCCGGTGT CGGTAGCTGC GATCGGAGCC AAAGCGCTTG AGGAAAAGCG CATCCTGACC
GACGCTGACC TTCAGTCTGC TACACCGGGC CTCACCGTGC GCCAGACCAA CTCGTCGAAC
CAGATCAGTT TCTCGCTGCG TGGCCAGTCG GTTGATGCAT TCTCGTTCGC TGCGCCTGCC
GTGCTGAACT ACGTCAATGA ATTCAACGCC CAATCGACAT CGGCAAGCGC ATTCTTTGAC
CTCACTTCGA TCCAGGCGCT CAAAGGTCCG CAGGGCACCT TGTTCGGACG CAACGCCACC
GGTGGTGCGG TTCTCTATGA AACTCGAAAG CCCGACACCG ATTTCGGCGG TTATATGAGG
CTGAGCTACG GCAACTACGA CGCCAAGTTC GCCGAAGGTG CAATCAACAT CCCGGGCGAG
ATTATTTCCG GGCGTCTCGC GGCGCAGTAT CAGAAGCGTG ATGGCTACCA GCGCAACTTG
CTGCTGGGCA TCCGCAACGG ATCAGTCGAC ACGTTTAGTG TGCGCCCGAC CATCCAGATC
GAAACTGGCG GTTTCAAGAA CGCTACGGTC TATCAATACA ATTATTCAGG TGGTTACAGC
ACAAGCTTGC GCGCCACCAA CTACTACGGC GTTGCCGGCA GTTCCGGCGC GGCGGGCGAC
CCGCTGAACA ACTTCGTCAA TGGTAAACCC GTCAACCTGT CTCTGAACTA TGGCCTTCCA
TCTGCCACAC TGTACCCCGA TGGCATTGCC GCGCTGCTCC AGGGTGGCGA GCGTTTCGCA
AGGTTTGGTT TCAGTGGCCT TCCCAGCTTC ATCGAAGCGC AGAAGAATTT TGGCTTCTAC
GACGTGTTTG ACGATCAGGA CGGAGCGCAC CTAAGTCGCC AGCATCTGGT CACCAATACC
ACGACGTACG AATTGTCGGA CGAGATGCAG ATCAAGAATA TCTTCGGCTA CAACCATTCG
CGTTCGCGCG ACCGTACGGA CGTTGACGGT ACGCCGTTTG ACCCGCTTCA GATCGGATTC
GGCGGAGGTA CGGGGCCGGC AAACCCGGGT GATCCGGCAG TCGGGGGCCG ATCTGCCGAG
GGTTACACCT ATGTGTCGCA GCAGCTGTCC AACGAACTCC AGATTTCCGG CAAGACTGGT
AACCTGAAGT ACATTGCAGG TCTCTACTAC TTCGAGGGCA AGGACTATCA ACGTCTCGCG
CTCACCTTTG CGCCAGACTA TTCGGCGGCG CTGGGCGATA CACTTGGTTT TTTTCTGCGA
GAATATACGA ACAAGACCAC ATCGAAAGGT GCTTATGCCC AGTTCACATA TGGTCTGACC
CCCGAACTGA ATGTTACAGC GGGCGGTCGC TGGACCTGGG AAAAATCGAG GTACACGCCA
ATGGACCGCG TGGCCGGTTC GTTTGACGTA TTCCAAGACG ACTTCAACAC CAGTCTCGGT
ATCACCGGGG GCACGTTGAA GGCCAACAAG CCAAGCTGGA ACGTCTCGGT AGACTACAAG
ATAACCCCTT CGTTGCTGGT CTACGCGGCC CAGCGCGGTT CTTGGCGCAC GGGCGGTTTC
AACGGCACTG CATCGAGCGT TGATGCTGCC GGCAACCCGA TCCCGAACTC GTTCAAGCCA
GAGACGACCT ACGACTTTGA GCTGGGTGCC AAATTCAACG GTCGCATCGG CGACATGCCG
GCGACCATGA ATGTGGCGGT TTACAACCAG AACATCAAGA ATGTCATCCG GGCGATTTAC
CTTGGCGTGG CGGCGGTTAG CGGCAATGTT GAAGAAGCAA GGGTTCGCGG TGTTGAAGCG
GACCTCTCCA TCCGCCCCAC TGACTGGCTT CAGTTGGGCG GTACGCTCGC CTACACAGAT
GCCAAGTATA CCAAGAACAC GGCAACTGTA GGTACCACCG TGGTGAAGTT CGGCCCCTAC
GGCGACGTTC CCAAGTGGTC GGGTTCGGCA TTCGCCAAAG TCGAGCATGA ACTGGGCGAT
GGCAGCGTGG CCTCGCTGCG GGGCGACGTC TACGCGCAGT CGAGCTTCTA CTATTCCAAT
GCAGCAAACA CGATTCTGCC AAGAACGCAG ATCGATGGAT ACGCACTGGT CGACCTGCGC
GCCGAATGGG GCAGGATCGG AGGTTCCGAC ATTTCAGTTT CGGCTTACGT GAAGAACCTG
ACAGACAAGA AGTACAACAC CGGCGGCTTT GCGCTGGGTG CGGTCAACGC GATCAACTCC
GTCCTGCCGG GACTTCCGCG CATGTATGGT CTGGAAGCCA AGGTCGAGTT CTAA
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| Protein sequence | MKSPILNRTR RSCLLMTSAL VSLSCVLVVS PAMAADEPQA ASTTEDIVVT ARRTSEKLSN
VPVSVAAIGA KALEEKRILT DADLQSATPG LTVRQTNSSN QISFSLRGQS VDAFSFAAPA
VLNYVNEFNA QSTSASAFFD LTSIQALKGP QGTLFGRNAT GGAVLYETRK PDTDFGGYMR
LSYGNYDAKF AEGAINIPGE IISGRLAAQY QKRDGYQRNL LLGIRNGSVD TFSVRPTIQI
ETGGFKNATV YQYNYSGGYS TSLRATNYYG VAGSSGAAGD PLNNFVNGKP VNLSLNYGLP
SATLYPDGIA ALLQGGERFA RFGFSGLPSF IEAQKNFGFY DVFDDQDGAH LSRQHLVTNT
TTYELSDEMQ IKNIFGYNHS RSRDRTDVDG TPFDPLQIGF GGGTGPANPG DPAVGGRSAE
GYTYVSQQLS NELQISGKTG NLKYIAGLYY FEGKDYQRLA LTFAPDYSAA LGDTLGFFLR
EYTNKTTSKG AYAQFTYGLT PELNVTAGGR WTWEKSRYTP MDRVAGSFDV FQDDFNTSLG
ITGGTLKANK PSWNVSVDYK ITPSLLVYAA QRGSWRTGGF NGTASSVDAA GNPIPNSFKP
ETTYDFELGA KFNGRIGDMP ATMNVAVYNQ NIKNVIRAIY LGVAAVSGNV EEARVRGVEA
DLSIRPTDWL QLGGTLAYTD AKYTKNTATV GTTVVKFGPY GDVPKWSGSA FAKVEHELGD
GSVASLRGDV YAQSSFYYSN AANTILPRTQ IDGYALVDLR AEWGRIGGSD ISVSAYVKNL
TDKKYNTGGF ALGAVNAINS VLPGLPRMYG LEAKVEF
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