| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1442 |
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| Symbol | |
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| ID | 3916106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1485464 |
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| End bp | 1487482 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640444185 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_496720 |
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| Protein GI | 87199463 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGCA TGGACGTGAA AGCCTTGATC TTGCGTTCCG GCGTCGCAGG CCTCCTGATT
CAGGCCCTCG CCGCCTCCAG CGCAGTGCAT GCTAGCGGTG CCGATGGGGC CGATGGCTCG
GACTGGGACC GCGCGCGCGC CAATCTGGTG GCCAGCCAGG GCGGCGCCAT GATGAACGCG
GTCGAACGGT GGAAACTCCT TTCCAGTTCC AACCGCTTCG GATTTTCGGA CTATTCGACG
TTCGTCCTTT CCTATCCCGG CTTTCCGGAC GAGGAGAAGC TGCGCCGGTA TGCCGAGCTT
TCGCTTGAAC GCGAGGCAGC AGACGCGAAC CGCCTTGTCG CATATTTCGA CAGCAAGCCA
CCGCTGACCA ATCTCGGGAG GGCGCAATAT GCCCTGGCGC TGATGCAGCT TGGCCGGCCC
GAAGCGCGCG AAACGGCGCG GGCTGCCTGG CGCGGCGGCC CGATGACCGA CAGCGCGGAA
AGCGCGCTTC GTTCTGCCTG GGGCTCCAGC TTCACCCTCG ACGACCATGA CGCGCGCATG
GACGCGTTGC TGTGGGCCGG GGCGACGGAG CAGGCGTCGC GTCAGTTGGC ATGGGTCAGT
CCCGCGCGCA AGGGCATCGA CACTGCCCGT CTGGCCGCGA TGCAGGGCGG CGATCCCTTT
GCTTCGCTGT CTGGCGTGTC GAGCGAGCAG CTCAACAGCG ATCCCGGATT CGTGTTTCAG
CGCGTCCGCC AGTTGCGCAA GGCCGGGCAG GGCCCCGCGG CCCGCGCGCT GCTCGCCAAC
CGTCCGCTTC TCATCCGCCA ACCACTCGAC CGCGAGAAAT GGGTCGAGGA ATTGCTCATC
AATGCCCGCG CGGCAGCAAG TGCCGGTGAC GCGCGCTCCG CCATGCGGAT CGCCGCCGGG
ATCGACGACG CGTTCTCTCC CGGAGAGGAC GTGAGCAAGG CCACTTATGG TCTGCGCGAC
GATTATACCT CGCTCATGTG GCTTGGTGGA ACGCAGGCGT GGTTCAACCT CGGCGATGGC
GCAAGCGCGG CGCCGCTGTT CTGGCGCTAT GGCGCGGCGG CGCGGACGCC GGGCACGCGT
TCGAAGGGCT TCTACTGGGC AGGCAAGGCG GCGGCTCGAG CAGGTCTTCA GGCCGATGCG
CGGCACTATT TCGAAATGGC CGCGCAATAC GGCGACCAGT TCTACGGCCT GCTGGCACTG
GAGCGCCTGG GGCGCCCCGT GCCGAAATAC GCGACCGATG CCACCTCCCA GATTTCTGCT
GAAGAACGTA GCCGTTTCTA CTCCCGCCCC CTCACCCAGG CCGTGCGCGA AGTGGCGCGC
AACGGAGATT GGCGCACGAC GGTCCGCTTC TTCAAGGAAA TCGCCGAGCA GCAGCAGAGC
GAGGCGCAGC ACATGATGGT GGCGCAACTC GCGCGCGATC TGGGGCGGCG CGATCTCGGC
GTGATCGTCG GGCAGGCAGC GGCGGCGCGC GGCTACCTCG ATTTCCAGCA CATCGCCTTC
CCCCTGATCC CCGTACCTCA GGGATACGAG ACCAAGTGGA CGATGATCCA CGCGATCAGC
CGGCAGGAAA GCCAGTTCGC GCAGAACGCG GTGAGCCACG CCGGCGCGCG CGGCCTCATG
CAGCTCATGC CGGGCACCGC AAACGAGCAG GCCGGAAAGC TTGGCCTCTC GTACGATGCC
TCCGCGCTGA CCGAGGACGC CGGGTACAAC ATCAGGCTGG GCTCGGGCTA TTTCCAGCGC
ATGCTCGACT ACTACGGCGG GTCGTGGCCG CTGGCCGTGG CAGCCTATAA TGCAGGGCCC
GGCAACGTGA ACAAATGGCT GCGCGCCAAC GGCGACCCCC GCAACGGTGG TATCGACTGG
ATCGAATGGA TGGAACGCAT CCCGTTGTCC GAGACGCGCA ATTACGTGCA GCGCGTACTG
GAAAACGCGG TGGTCTACGA AGCGATGAAT CCGCAGTACG CCAGCTATCG CGGGGCAAAT
CCGATGAGCT ACTTCATCGG CAAGCGGGAG CCGGGCTGA
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| Protein sequence | MSRMDVKALI LRSGVAGLLI QALAASSAVH ASGADGADGS DWDRARANLV ASQGGAMMNA
VERWKLLSSS NRFGFSDYST FVLSYPGFPD EEKLRRYAEL SLEREAADAN RLVAYFDSKP
PLTNLGRAQY ALALMQLGRP EARETARAAW RGGPMTDSAE SALRSAWGSS FTLDDHDARM
DALLWAGATE QASRQLAWVS PARKGIDTAR LAAMQGGDPF ASLSGVSSEQ LNSDPGFVFQ
RVRQLRKAGQ GPAARALLAN RPLLIRQPLD REKWVEELLI NARAAASAGD ARSAMRIAAG
IDDAFSPGED VSKATYGLRD DYTSLMWLGG TQAWFNLGDG ASAAPLFWRY GAAARTPGTR
SKGFYWAGKA AARAGLQADA RHYFEMAAQY GDQFYGLLAL ERLGRPVPKY ATDATSQISA
EERSRFYSRP LTQAVREVAR NGDWRTTVRF FKEIAEQQQS EAQHMMVAQL ARDLGRRDLG
VIVGQAAAAR GYLDFQHIAF PLIPVPQGYE TKWTMIHAIS RQESQFAQNA VSHAGARGLM
QLMPGTANEQ AGKLGLSYDA SALTEDAGYN IRLGSGYFQR MLDYYGGSWP LAVAAYNAGP
GNVNKWLRAN GDPRNGGIDW IEWMERIPLS ETRNYVQRVL ENAVVYEAMN PQYASYRGAN
PMSYFIGKRE PG
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