| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1437 |
|---|
| Symbol | |
|---|
| ID | 3916101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1482804 |
|---|
| End bp | 1483475 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640444180 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_496715 |
|---|
| Protein GI | 87199458 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TCTGCGCAAT CCTCGCCGCC GGCACTGCCA TCGCTGCTGC TCCTGCGTAC
GCGCAGGACG CCACGCCCGC CGAAGCCTTC AGCGGTTTCC ACGCCGAAGC TCTCGTGGGC
TATGACCACA ACCGCTCCGG CAGCAGCGAA GATGTCGACA ACACCCGCGA TCTCAAGCAG
TCCATCGACG GCGTCGAATA CGGCGGCGCG ATCGGCTATG ACATTCCGCT TGGCACCAAT
CTTGTCGCCG GTGCCGAAGC TGAAATCACC GACAGCAGCG CGAGCTGGGA CAACAACAAC
GACCAGCCCA ACGTCTTCAA CCTCGGTCGC GTCGAAGCGG GCCGCCAGTA CTACGTCGGC
GCCCGTCTCG GTTATGCAAT GTCGCCGAGC ACGATGGTCT ATGTGAAGGG TGGCTACAGC
AACGCCCGCT ATAACCTTCA GGGCACCGAC GGAACCACTA ACCTGCGCCA GCGGCTTGAC
GCCGACGGCT ACCGCGTGGG TGCCGGCGTC GAGCAGAAGG TTGGCGAGAA CGCCTTTGTG
AAGCTCGAGT ACAAGTACGC AAACTACAGC AAGGGCGAAT TCGACTTCAA CGGCGACACG
CCGGACAGCA GCCGCTTCAA CCTCGACACC GACCGTCATT CGATCACCGC CGGCGTTGGC
GTCCGCTTCT GA
|
|---|
| Protein sequence | MKKICAILAA GTAIAAAPAY AQDATPAEAF SGFHAEALVG YDHNRSGSSE DVDNTRDLKQ
SIDGVEYGGA IGYDIPLGTN LVAGAEAEIT DSSASWDNNN DQPNVFNLGR VEAGRQYYVG
ARLGYAMSPS TMVYVKGGYS NARYNLQGTD GTTNLRQRLD ADGYRVGAGV EQKVGENAFV
KLEYKYANYS KGEFDFNGDT PDSSRFNLDT DRHSITAGVG VRF
|
|---|
| |