Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1432 |
Symbol | |
ID | 3916096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1474448 |
End bp | 1476196 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640444175 |
Product | hypothetical protein |
Protein accession | YP_496710 |
Protein GI | 87199453 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAGCCT ATGACCTCAT CATCCGCAAT GGCACCATTT GCGACGGGAC CGGCGCGCCG CGCTTCACCG GCGACGTCGC GGTGAAGAAC GGCCTGATTG TCGCGGTCGG CGCCGTTCGC GGCGACGCAG CCGAGGAAGT CGACGCGACG GGGCGCATCG TCGCCCCGGG CTGGGTCGAC GTGCACACGC ACTACGATGG CCAGGCCACC TGGGATCCCG AAATGGCACC GTCATCATGG CACGGGGTCA CCACTGTCAT CATGGGCAAC TGCGGGGTCG GCTTCGCACC GGCCGCACCC GACCGGCACG ACTGGCTCAT CGGCCTGATG GAAGGCGTAG AGGACATTCC CGGCACGGCG CTTGCCGAAG GGATGGCCTG GGACTGGGAG AGCTTCCCGG AATACCTCGA TTCCCTCGAA AAGATGCCGC GCGCCGTCGA TGTCGGCACG CACGTGCCCC ACGGCGCCGT GCGTGCCTAC GTACTTGGCG AAAGAGAGAA GCCGGGCGCC GTGCCGACTG CGGAAGACAT CCGGAAGATG TCGGAAATCG TCGAGGAAGG TGTCCGTGCC GGTGCGCTTG GATTTTCGAC CAGCCGCACG GTCATCCACA AGTCGGTCGA TGGCGAAGTC GTTCCCGGAA CAACCGCGAC GGCCGAGGAA CTGATCGAGA TCGGCCGTGC CATGGGCCGC GTTGGCCACG GCGTGTTCGA AATGGCGTCG GACATGAAGC GCGAATGGGA CGAATTCGGC TGGATGGGTG CGCTCAGCCG CGAAACCGGC CTGCCTGTCA CCTATGCAGC GCTACAGTCC ATCGCCAAGG AAATGCCGCT CGAGGAACAG ATTGCCGAAA TGCGCCACCA GAACGCGCAA GGCGCCAATA TCGTGGCGCA GATCGCGCTG CGCGGGAACG GCGTGATCAT GGCCTGGCGG GGCACCATTC ACCCCTTCCG CTTCCGGCCG AGCTATGCCG CAATCGCCGA GCTTCCCTGG GAAGAGCAAC TCGTGCAACT CAAGGACCCG GCGTTCAGGG CAAAGGTCCT GGCAGAGGCG AACGTTTATC CCGACAGCGA CATCGTGAAC CTGTTCCGCA TGATCGCCGA AGGCTGGCAC AACCAGTTCA TCATGGACGA GGACTTCGAC TACGAACCTC AGCCCGAGGC CAGCATCCTG CTTCGCGCGA AGACTGCGGG CGTATCACCC GACGCCTTCG CCTACGACAA GCTGATGGAA GATGAGGGCA ATGGCTTCAT TTACCTGCCC ATCCTGAACT ACGCGGACGG AAACCTCGAT TTCCTCGAGG CGCTTCAGGC CGCGGACGAT ACGGTAAACT CGCTGTCGGA CGGCGGAGCG CATTGCGGTA CGATCTGCGA TGCGGCGAGC CCGACCTTCA TGCTCCAGCA CTGGGTTCGC GACCGTCGCA GGGGCAGCCG GATCAGCCTG GAACACGCCA TCAAGCGTCA ATGCCACGAT ACGGCGCGGC TCTATGGCCT GGACGACAGG GGCGTGATCG CGCCGGGATA CCTGGCTGAT ATCAACGTGA TCGACTTCGA CCGCGTGCGC CTGCTCAAGC CCTGGCTCGC GTTCGACCTT CCCGCTGGCG GCAAGCGGCT GCTGCAGAAA GCGGAAGGCT ATGACTACAC CATCAAGGGC GGAAAGGTGA CCTTCCGCAA CGGCGAATGG ACGGGTGCCA CGCCGGGCAA CCTCATTCGC GGACCACAGC GCGCCGATCT CATGGAGGCT GCCGAATAA
|
Protein sequence | MPAYDLIIRN GTICDGTGAP RFTGDVAVKN GLIVAVGAVR GDAAEEVDAT GRIVAPGWVD VHTHYDGQAT WDPEMAPSSW HGVTTVIMGN CGVGFAPAAP DRHDWLIGLM EGVEDIPGTA LAEGMAWDWE SFPEYLDSLE KMPRAVDVGT HVPHGAVRAY VLGEREKPGA VPTAEDIRKM SEIVEEGVRA GALGFSTSRT VIHKSVDGEV VPGTTATAEE LIEIGRAMGR VGHGVFEMAS DMKREWDEFG WMGALSRETG LPVTYAALQS IAKEMPLEEQ IAEMRHQNAQ GANIVAQIAL RGNGVIMAWR GTIHPFRFRP SYAAIAELPW EEQLVQLKDP AFRAKVLAEA NVYPDSDIVN LFRMIAEGWH NQFIMDEDFD YEPQPEASIL LRAKTAGVSP DAFAYDKLME DEGNGFIYLP ILNYADGNLD FLEALQAADD TVNSLSDGGA HCGTICDAAS PTFMLQHWVR DRRRGSRISL EHAIKRQCHD TARLYGLDDR GVIAPGYLAD INVIDFDRVR LLKPWLAFDL PAGGKRLLQK AEGYDYTIKG GKVTFRNGEW TGATPGNLIR GPQRADLMEA AE
|
| |